Halichoeres trimaculatus (threespot wrasse): 141790106
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Entry
141790106 CDS
T11192
Symbol
smarca2
Name
(RefSeq) putative global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141790106 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htc03021
]
141790106 (smarca2)
03036 Chromosome and associated proteins [BR:
htc03036
]
141790106 (smarca2)
Transcription machinery [BR:
htc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141790106 (smarca2)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
141790106 (smarca2)
Chromatin remodeling factors
BAF complex
141790106 (smarca2)
PBAF complex
141790106 (smarca2)
GBAF(ncBAF) complex
141790106 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
141790106
NCBI-ProteinID:
XP_074525848
LinkDB
All DBs
Position
Unknown
AA seq
1587 aa
AA seq
DB search
MSTPLDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QSQGQSDYSQDAMYPMHKPMEGMNDKTMADAMHFGHMKGVGMRTLHSGMGPPQSPMDQHS
QGYMSPHPSPMSVHEHASSPMSGGGGGGGPTPPHIPPSQSGPMMPMDPQGAMPNMSQQGR
GPSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQHQHQQQQQQ
QQQAPSASPYNRPHGMPMAPMGGPQSSPCPTPVMQGHNQSTGPKPWSDGQGVENQANIQK
HLTPVASGRPSPAPPQASAVPAGPAPGSSVTPQPPGQQVSPMLQMQQKQNRITPIQKPQG
LDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDV
VACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSIL
QHAKDFKEYHRSVSGKIQKLTRAIANWHTNTEREQKKETERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTALVYEHKAAQAAKEKKRRKKKKKKVDGDGEGTSAI
GPDGEPMDESSQMSELPVKVIQTETGKVLQGTEAPKSSQLEAWLEMNPGYEVAPRSDSEE
SGSEYEEEEDEETTKAETEEKKIIDPNGEGNVATAKHIIESAKQDVDDEYSVPTGQTFSQ
SYYGVAHQVVERVEKQSSLLINGTLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQT
IALITYLMEYKRINGPFLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQLR
SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL
TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH
KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKG
GAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIINGPDLYRASGKFELLDRILP
KLHATNHRVLLFCQMTTLMTIMEDYFSYRNFQYLRLDGTTKSEDRAALLKKFNEEGSQYF
IFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV
EEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRVFLQAILEHEEQNEEEDEVPDDETLN
QMIARNEDEFELFMRMDMDRRREHARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEE
EKMFGRGSRCRRDVDYSDALTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSSSRD
EGSSKAKKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGSGRQLSEVFVQLPSRKEL
PEYYELIRKPVDFKKIKDRVRNHKYRSVGDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQ
SVFKSARQKIAKDEDSEDDSDEDEDDDDESESEAKSVWVKIKLIKEGRSADKGKKRQSRG
KAKPVVSDDDSDEDQDDNDQSDKSEDE
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccattagacacttcaggtggtatgtctcatccaggcccttctccaggggca
ggtctgtccccagggcccatcttgggtcccagccctggaccagacccctcaccaggctct
gtccacagcatgatgggaccaagtcctggacctggaacacccaacgcgcctcatggcatg
cagagccaggggcagagtgattactctcaggacgcaatgtatcctatgcacaagcccatg
gagggaatgaatgacaagaccatggcagatgcgatgcactttggtcatatgaaaggtgtg
gggatgagaaccctgcatagtggtatggggcctcctcagagtcctatggaccagcacagt
caaggatacatgtccccccatccctcccccatgagtgtccacgagcatgcttccagtccc
atgtccggaggaggtggaggtggtggtcccactccgccccacatacctccctcccagtca
ggcccgatgatgcccatggatccacagggagccatgcccaacatgagccagcagggtcga
ggaccttctgctttcagtccggtccagcttcagcagctcagagctcagatcctggcctac
aaaatcctgggacgtggccagcctctgcctgaaaacctccaactggctgttcagggtaag
aggagtctacccacaatgcagcagcagcagcaacatcagcatcaacaacaacaacagcag
cagcaacaggctcccagtgccagtccttacaacagacctcatggtatgccaatggcaccc
atgggtggtccacagtcaagtccctgtcctaccccagtcatgcaagggcacaatcaaagc
acaggaccaaagccttggtctgatggtcagggcgttgaaaatcaagccaacatccagaag
cacctcacccctgtagccagtggacgcccatcgcctgcaccccctcaggcctctgctgtg
ccagctggtcccgcgcccggcagctcagtgacgccccagcctccagggcagcaggtgtcc
cccatgctccagatgcagcagaaacagaaccgcatcacacccatccagaagcctcagggc
ctggaccctgtgggcatcctacaggagagggagtacagattgcaggctcggattgcacat
agaatccaggagctggagagtttgccaggatctctgccacctgacctgaggactaaagcc
accgtggagcttaaggctctgcgcctgctcaacttccagcgacagctgagacaggacgtg
gtggcatgcatgaggcgagacaccaccctggagacagctctcaactcaaaggcgtacaga
cgcagcaagcgtcagacgctgagggaggcccgcatgacagagaagctggagaagcagcag
aaactggaacaggagaagaaacgcagacagaaacatcaggaatatctcaacagcatcctt
cagcatgctaaagacttcaaagagtaccaccgctcagtgtctgggaaaatacagaaactc
accagagccatcgccaactggcacaccaacactgagcgagaacagaagaaggagacggag
aggattgagaaggagaggatgaggaggctgatggcagaggatgaggaaggctaccggaaa
ctcattgaccaaaagaaagacaagcgtctggcctacctgctgcagcagacagacgagtac
gtggctaacctcactgcccttgtgtacgaacacaaagctgcccaggctgccaaggagaag
aagaggaggaagaagaagaagaagaaggtggatggtgatggagagggaaccagtgccatt
ggacctgatggagagcctatggatgagagcagccaaatgagcgagctgccggtcaaagtg
attcaaacagagactgggaaagtcctgcagggaacagaagctcctaaatccagtcagctg
gaggcctggctggagatgaatcctgggtatgaagtggccccgcggtcagacagcgaggag
agcggctcagagtacgaggaagaggaggacgaggagactaccaaggcagagacagaggag
aagaagataatcgatcccaacggagaaggaaatgtggcgacagccaagcacatcatcgag
tcagccaagcaggatgtggacgatgagtacagtgtccccactggacaaaccttctcccag
tcttactacggtgtggctcaccaggttgttgagcgggtggagaagcagtcctcgctgcta
atcaacggcacgctcaaacactaccagatccagggtctggaatggatggtgtctttgtac
aacaacaaccttaacggcatccttgctgatgaaatgggcctcggcaaaacaatccaaacc
atcgccctcatcacctacctgatggagtacaagaggatcaacggccccttcctcatcatc
gttcctctctcgactttgtcaaactgggtttatgaactcgacaagtgggccccctctgtg
gtgaaaattgcctacaagggcacccctgccctgcgccgtgggcttgtgcctcagctgcgc
agcgggaagttcaatgtcttgctgaccacctatgaatacatcatcaaagacaagcacata
ctggccaagattcgttggaagtacatgatagtggacgagggtcaccgcatgaagaaccac
cactgtaagctgacccaggtgttaaacacccactatgtcgcacctcgacgcctcctcctc
accgggactccgctgcagaacaaactgcctgagctgtgggctctgctcaacttcctgctg
cccaccatcttcaagagctgcagcaccttcgagcagtggttcaacgccccattcgccatg
acgggagagagggttgatctaaatgaagaggagaccatcctgattattcggcgtctgcac
aaagtgctccgccccttcctgctgagaagactgaagaaagaggtggagtcccagctgcca
gagaaggtggagtatgtcataaaatgtgacatgtctgccatacagaaggttctgtatcgc
cacatgcagaaaggaattcttctcacagacggctcagagaaagacaagaagggcaaaggt
ggagcaaagaccctgatgaacaccatcatgcagctgaagaagatctgcaaccatccgtac
atgttccagcacattgaggagtcttttgccgagcacttgggctatccaaatggaataatc
aatgggcctgatctgtatcgagcctctggcaagtttgagctcctggaccgcatcctgcca
aagcttcacgccacaaaccacagagtacttctcttctgccaaatgacgactctcatgacg
atcatggaggactacttcagctaccgcaacttccagtatttacgcctcgatggaaccaca
aagtctgaagacagggcggcacttctgaagaaatttaatgaggaaggatctcagtacttc
atcttcctgctcagcaccagagctggtgggctcggactcaacctgcaggctgcggacaca
gtcgtcatctttgacagcgactggaatccacatcaggacctccaggctcaggacagagct
caccgcatcggtcagcagaacgaggtgcgggtgctccgtctctgcaccgtcaacagcgtg
gaggagaaaatcttggcagctgccaaatacaaactgaacgtggatcagaaggtcatccag
gccggcatgttcgaccagaagtcctccagccacgagcgccgcgtcttcctgcaggccatt
ctggagcacgaggagcagaatgaggaagaagatgaagtacctgatgatgagaccctgaac
cagatgattgctcgcaatgaggatgaatttgagctctttatgcgcatggacatggaccgc
agacgagagcacgccaggaaccccaagcgtaaacctcgcctcatggaggaggatgagctg
ccttcctggatcatcaaagacgacgctgaggtcgaacggctcacatacgaggaggaggag
gagaagatgttcggtcgaggctcacgctgccgccgggacgtggactacagcgatgctctc
actgagaaacagtggcttcgggccatcgaggatggaaacctggaggagatggaggaagaa
atccggctgaagaagcgcaaacgtaagagacgtcaagacaaggactcatcaagcagagac
gaagggagctccaaggccaaaaagagacgtgggcgtcctccagctgagaagctttctccc
aaccccccgaaactcaccaagcaaatgaacaccatcatcgatacggtcatcaactacaga
gacgggtcagggagacagctgagtgaggtctttgtgcagttaccatccaggaaggagctc
cctgagtattacgagctcatcaggaaacctgtggacttcaaaaagatcaaggaccgcgtg
aggaaccataaatacaggagtgttggagacctggagaaggatgtgatgctgctttgtcac
aacgcccagacctacaacctcgagggatcccagatttatgaggactccatcgtccttcag
tccgtcttcaagagcgcccggcagaagatcgccaaagacgaggacagcgaagacgacagc
gatgaggacgaggatgacgatgatgagtcagagtcagaggccaagtcagtgtgggtcaag
atcaagctgattaaggagggacgcagcgctgacaaagggaagaagaggcagagccgaggg
aaggcaaaacctgtggtcagtgacgacgacagtgacgaagatcaggacgacaatgatcag
tcagacaagagcgaagacgagtga
DBGET
integrated database retrieval system
