Halichoeres trimaculatus (threespot wrasse): 141790619
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Entry
141790619 CDS
T11192
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141790619 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141790619 (lsm1)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141790619 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
141790619 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
141790619
NCBI-ProteinID:
XP_074526725
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDVDKPCDTLLQQVSIEEILEEQRLEQQAKQETEKVKMQVLKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtgccagggacggcaagcctcattgacgacatcgacaagaagcacctggtg
ctgctacgagatggaaggacgctgattggttacctgagaagcattgatcagtttgccaat
ttagttttccatcaaactgttgagcgcatccatgtggggaaaaaatttggtgacattcct
agaggaatattcatcgtgagaggagagaatgtggtactgcttggagagatagatgtggat
aaaccctgcgacactctcctgcagcaggtttccattgaagagatcctggaggagcaacga
ttggagcagcaagccaaacaggagacagagaaagtgaaaatgcaggtcttgaaggaccga
ggcctctccatccctaaagctgataacttagatgaatactaa
DBGET
integrated database retrieval system
