Halichoeres trimaculatus (threespot wrasse): 141790924
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Entry
141790924 CDS
T11192
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03030
DNA replication
htc03410
Base excision repair
htc03420
Nucleotide excision repair
htc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141790924 (rfc5)
03410 Base excision repair
141790924 (rfc5)
03420 Nucleotide excision repair
141790924 (rfc5)
03430 Mismatch repair
141790924 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
htc03032
]
141790924 (rfc5)
03036 Chromosome and associated proteins [BR:
htc03036
]
141790924 (rfc5)
03400 DNA repair and recombination proteins [BR:
htc03400
]
141790924 (rfc5)
DNA replication proteins [BR:
htc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
141790924 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
141790924 (rfc5)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
141790924 (rfc5)
DNA repair and recombination proteins [BR:
htc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
141790924 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
141790924 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_lid_RFC1
AAA_14
RuvB_N
ResIII
AAA_24
DEAD
AAA_assoc_2
DUF815
AAA_16
PhoH
nSTAND_NTPase5
AAA_7
AAA_19
AAA_5
ATPase_2
TIP49
AAA_30
nSTAND3
AAA_2
Mg_chelatase
Thioredoxin_6
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
141790924
NCBI-ProteinID:
XP_074527188
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MASTSKAPLQTRNLPWVEKYRPQTLDDLISHKDILSTIQRFITEDKLPHLLFYGPPGTGK
TSTILACAKQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQDQMIPRL
EHVIQQENVDLTPDGMKAIVTLSCGDMRRSLNILQSTSMAYGKVTEDTVYTCTGHPLRSD
IANILDWSLNKDFTTAYKQILQLKTVKGLALHDILTEVHLLLHRVDFPPAIRIGLLIKLA
DVEHRLASGTDEKIQLSSMVAAFQAVRDLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacgagtaaagctcctttacagaccaggaatctcccatgggttgagaaatac
agaccacaaacactagatgatctgatctcacacaaagatattctgagcacaatccagagg
ttcatcacagaggacaagctcccccatctcttgttttacggccctcctggaacaggaaaa
acctccaccatcctggcctgtgctaaacagctgtacaaagacaaagagttcaactccatg
gtgttggagcttaatgcatcagatgacagaggtattgatgttgttcgaggtccgattctg
agtttcgccagcaccaggaccatcttcaagaagggcttcaagttggtgatactggacgag
gccgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaagttcaca
gaaaacactcgcttctgtctcatctgtaactacctgtccaagattatcccagctctgcag
tctcgctgcaccaggtttcgcttcggcccactgtcccaggaccagatgatccctcgcttg
gagcatgtgatccagcaggagaatgtcgacttaactccagatggaatgaaagccattgtg
accttatcatgtggcgatatgagaagatcgctcaacatacttcagagcaccagcatggca
tacgggaaggtgacggaggacacggtgtacacctgcacaggtcatcctctccgctctgat
atcgccaacatcctggactggtctctcaacaaagacttcaccaccgcgtacaaacaaatc
cttcagctgaaaactgtaaaaggtttggccctgcatgatattctcactgaggttcatctg
ctgttacacagagtggatttccctcctgctatccggatcggtctcctcatcaagctggct
gatgttgaacacagactcgcctcaggaaccgatgagaagatccagctcagctccatggtc
gcagcgttccaggcagtgagagacctggtggtcagcgaggcttcataa
DBGET
integrated database retrieval system
