Halichoeres trimaculatus (threespot wrasse): 141790942
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Entry
141790942 CDS
T11192
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03030
DNA replication
htc03410
Base excision repair
htc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141790942 (pole)
03410 Base excision repair
141790942 (pole)
03420 Nucleotide excision repair
141790942 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
htc03032
]
141790942 (pole)
03400 DNA repair and recombination proteins [BR:
htc03400
]
141790942 (pole)
Enzymes [BR:
htc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
141790942 (pole)
DNA replication proteins [BR:
htc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
141790942 (pole)
DNA repair and recombination proteins [BR:
htc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
141790942 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
141790942
NCBI-ProteinID:
XP_074527212
LinkDB
All DBs
Position
Unknown
AA seq
2292 aa
AA seq
DB search
MVLQNSGRYRAERGQSGDQENQDDGSAMSALKRLERSQFTDEMDARFGFDRMKEPGEKTG
WLINMHPTEILDEDKRMISAVDYYFIQEDGNRFKVALPFKPYFYIATKKNCEREVISYLS
KKFQGKVAKLEIVPKEDLDLQNHLVGLKRNYIKLSFNTVDDLIKVKREISPAVRKNRERE
QSNDAYTSMLSSALSGGNVTSADDEGTMKSITDQLDNIVDMREYDVPYHVRLSIDLKIHV
AHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYMI
DGQGFLITNREIVSENIEDFEFTPKPEYDGPFTVFNEDDEAALIQRWFEHVQETKPNIFV
TYNGDFFDWPFIETRAALHGLSMHREIGFQKDSQGEYKSSQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAIEEEEKIPLEQVTNFNEVC
DEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
AACQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHTLNREEQAKHEK
KRLADYCKKAYKKTHVTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGA
NIITQAREIIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNIM
VKEGFTNDQYHELVDPASLTYNTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSRKLEEYGEQKSTSISTAKRLAEFLGDQMVKDKGLSCRYVI
SRKPEGSPVTERAIPLAIFQAESSVKKHFLRKWLKMPSMHDLDIRSILDWGYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQPL
PAGQAADIEDFGMPAKPLQPAILISTKRKRVSQGEDSQVESQDMELTQSWREILGPPPPM
GNTREERLVWLRYHKKKWELQLRQRKERKKRRRLLDGEAQPVGGGVIRDGPTTGLGSFLR
RTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGAM
YKKVNRMLPRSNMVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCVCMVNKHVVRDLAGKEADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALF
GLFIPSQRKASIFILDTVRSNQMPNLGNLYTAERTSLLEKTTEELLPPEKHNFDVRAEND
VKAIYRALQRILLNYKEERRGPTLIALQSNWELRRLAAGMPVLEEFPVVPVHVVDEISYN
VLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDERGSVEINAQGCYSTVCVELDLQSLAVNTIL
QSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRLG
STVVYGNFNRILLCTKKRRIDDAIGYVEYITNSIHSREIFHSLSITFSRCWEFVLWMDPA
NYGGVKGKLPSSLLFGEDAAKDKRKRQEEGDDEGSEDEEENEVEEEDGDGETDEVEELIE
SNWNIMQYLPQTASCQKYFLMIISAYIAAVYHSMKEELRRNAPGATPVKRRADSQASQQA
VGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVTQPSEMFPVLPGSHLPL
NNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSENAHFRDPCNSYVLLEVI
CHHCNFCRDLDLCKDPAVAQDGSVLPQWFCSNCQAQYETESIEMALVEALQKKLMSYTLQ
DLVCTKCKGVKEANMPLYCKCAGSFELTFPAKSFSEQIMVFRSIASHYNMSFLEETIDWL
LVMSPHINQSIH
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaaacagtggaaggtaccgagcggaaagaggacaaagtggagaccaggaa
aaccaggacgatggatccgcgatgtcagcactcaaacgactggagcgcagtcagttcact
gacgagatggacgcacgcttcggattcgacaggatgaaggagccaggggagaaaacgggt
tggctgatcaacatgcatcctacagagatcctggatgaagacaagagaatgatcagtgct
gtggactattatttcattcaggaggatggaaatagatttaaggtggctctcccatttaag
ccatatttctacattgccactaaaaagaactgcgaaagagaagtcatctcatacttatca
aaaaagtttcaaggaaaggtggcaaagcttgaaattgtgcccaaggaggatcttgacctg
caaaatcacctcgttggactcaagaggaactacattaagctgtcattcaacactgtggat
gatctcattaaagtcaaacgtgagatctcacctgcagtacgcaagaacagagagagggag
cagtcaaatgatgcctacacttctatgttatccagtgccttatcaggtggcaatgtgact
tcagccgacgatgaagggacaatgaagagcatcacagaccagttagacaacattgttgac
atgagggaatacgatgtgccctaccatgtgcggttgtccatcgaccttaagatccatgtg
gctcactggtacaatgtgcgatacagaggcagcgcttacccacctgagattgtacgaaga
gatgatcttgtggaacgaccagaccctgttgttctggcttttgacattgagaccacaaaa
ctcccactgaaattcccagatgcagagagcgatcagattatgatgatctcctacatgatt
gatggacaggggtttctgatcacaaacagagaaatcgtctctgagaatattgaagatttt
gagttcactcccaaacctgagtatgatgggcctttcacagtgtttaacgaggatgatgag
gcggctctcattcagaggtggtttgaacatgttcaagaaaccaaaccaaacatctttgtc
acctacaatggggacttctttgactggcctttcattgagacccgggctgctcttcatgga
ctgagcatgcacagagagatcggtttccagaaggacagtcagggggagtacaagtccagt
caagccatccatatggactgcctaaggtgggtaaagagagacagctacctgcctgtagga
agccacaatctaaaggcagcagcgaaggcaaaactcagctatgacccagtggagctggat
ccagaggagatgtgccgcatggcaactgaggagccacagactttagcaacgtactctgtg
tccgacgctgtggccacttattacctgtacatgaagtatgttcaccccttcatctttgct
ctgtgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttctggcactctg
tgtgaggccttgctcatggtgcaagctttccatgcaaacattatcttcccaaacaaacag
gagcaggtcttcaacaaactcacagatgatggccatgttttggactctgagacctacgtg
ggtggccacgtggaggcgctggagtcaggcgtgttccgcagtgacatcccctgccgcttc
aaaatgaatccagctgcattcgacttcctgttgcaaagagttgagagaacgatgcgacat
gccattgaggaagaggagaaaatccctttggagcaagtcaccaacttcaatgaggtttgt
gatgagatcaaaaagaagctgacctccttgaaggaggttccaaacaggatcgagtgtcca
ctaatctaccatctggatgtcggcgccatgtaccccaatatcattctcactaaccgtctg
cagccatctgcaatggttgatgaagccacctgtgctgcctgtgactttaacaagcctggt
gctgcctgtcagcggagaatgacttggcagtggagaggagaaatcatgcccgccagccgc
agtgagttccatcgaattcagcagcagcttgagtcagagaagttcccgccattttttcct
aatggtcctcctcgagccttccacacactcaacagagaggagcaggccaaacatgagaag
aaacgtctagcagactactgcaagaaggcgtacaagaagactcacgtcaccaagctggaa
gagcgagtcaccaccatatgtcagagagaaaactcgttctacgtcgacactgtaagagct
ttcagagaccgacgatacgaattcaaaggactccacaaggtgtggaagaagaagttgtca
gcagctcaggacaatggagatgctgccgaggtgaagcgctgcaaaaacatggagatcctc
tatgagtctctgcagctggctcacaagtgtattctcaactctttctatggttacgtcatg
aggaaaggggcacgctggtactccatggagatggctggcatcgtgtgctacactggagcc
aacatcatcactcaggccagagagatcattgaacaaataggacggcctctagagttggac
actgatggtatctggtgtgtccttcccaacacctttcctgagaactttgtggtgaaaacc
agtaacgaaaagaagcccaaagtgaccatctcctaccctggagccatgctaaacatcatg
gtaaaggagggcttcaccaacgatcagtaccacgagctggttgaccctgcctccctcaca
tacaacaccaggtcagaaaacagcatcttctttgaggtggatgggccgtacctggccatg
atcctgcctgcatccaaagaggaggggaaaaaactgaagaaaaggtatgctgtgtttaat
gaggacggctccctggctgagctgaagggttttgaagtgaagaggagaggagagctccag
ctcattaagatttttcagtcttcagtgtttgaggcttttctcaaaggaaccaccctggag
gaggtgtacgcctctgtggccaaagtggccgactactggctggatgttttgtacagcaag
gctgccaacatgccagatgcagagctgtttgaactgatctcagagaatcggtcgatgtcc
aggaagctggaggagtacggagagcagaagtcgacatccatcagcacagcgaagaggctt
gctgagtttcttggggaccaaatggtgaaagataaaggtctgagctgccgctatgtcatc
tccagaaaacctgagggctctcctgtcacagaaagagctattcctctggccatctttcag
gccgagtccagcgtgaaaaaacatttcctccgtaagtggttgaagatgcccagcatgcat
gacttggacatccgctctatccttgactggggttactacatagagcgtttgggtagtgcc
atccagaaaatcatcaccattcctgccgctcttcaacaggtgaagaatccagtacccaga
gtgaggcatcctgactggcttcacaagaaactcctggagaaaaatgatatatacaagcag
aagaagatcagtgagctcttcaccagtgagggcaaaagacaggtggcccatcagcctctt
ccagcaggccaagctgcagacattgaggacttcgggatgccagccaagcctctgcagcca
gccatcctcatcagcaccaaaaggaagcgtgtttctcagggagaggacagtcaggtggag
tctcaggatatggagctcactcagtcctggagagagatcctggggccgcccccacccatg
ggaaacacacgggaggaacgtcttgtgtggcttcgctaccacaagaagaagtgggagctg
cagctgaggcaaagaaaagaaaggaagaagaggaggaggctgctggatggcgaagctcag
cctgtagggggaggagtgatcagagatggcccaacaacaggcctggggagcttcctccgc
agaacagcgcgcagcatcctggacatgccatggcaaatagtgcagattgcagaaacaagt
caccctggtctgtacaagctgtgggctgtcatcggaaatgacctccactgcatgaagctc
aacatccctcgagtcttctacgtcaaccagaaagtcccaaaacaagaggagggcgccatg
tacaaaaaggtaaaccgcatgctgcctcgctccaacatggtctactacctgtatgagtac
tgcgtgccagaggacatgtaccaggagcacatcaatgagatcaacgctgacctgtctgct
ccagacatcgaaggagtttatgaaacacaggtcccgttgctgtttcgagctctggtgcag
ctgggatgtgtgtgtatggtcaacaaacatgtggtgagggatctggcaggcaaggaggcc
gacacatttgaccttgagcatctggagatgaggtctctggcccagttcagctacttggaa
cctgggagtgttcgccacatgtacttgtatcatcacagccagggtcacaaggctctgttt
ggcctcttcatcccctctcagcgtaaagccagcatcttcatcctggacactgtgagaagc
aaccagatgcctaacctgggtaacctctacacagctgagcgcacctccctcctggagaag
acaacagaggagctccttcctccagaaaaacacaactttgatgtccgagctgaaaatgac
gtgaaagctatttaccgcgctctgcaacgcatactgctgaactacaaggaggaacgccgt
gggcccactctcattgcgttgcagtcaaactgggagctgcgacggttggcagcagggatg
ccagttcttgaggagtttccagtcgttccagtacatgtagtggatgaaatcagttataat
gtgctggactggcaacgccacggtgcacgacgcatgattcgccactacctcaacctggac
agctgcctgtcacaggcctttgacatggccaggtattatcacctacctgtggggaatttg
cctcaggatgtgtccatctttggctcagacttgttccttgcaagacatctacgcaaacac
aaccacctgttgtggctgtcacccacagcgaggcctgaccttggaggaaaagaggctgat
gatagccgacttgtgatggaaagtgatgaaaggggctcagtggagatcaacgctcaagga
tgctattctacagtgtgtgtggagctggacctgcagagcctggcagtgaacaccatactc
cagtcacagcacgtcaacgacatggagggcggagccagtctgggtgtcagttttgatgtg
atccagcaggcctcgttggaggacatgatgtctggcaaccagggagccagcgcactggct
agctatgatgagactgctctctgctccaacactttcaggattctgaagagcatggtggtt
ggatgggtcagggagattacacaataccataacgtttatgcagacaaccaggtgatgcac
ttctaccgctggctgcgctctcccagctctcttctctatgaccctgcactgcatcgtacg
ctgcacaacatgatgaagaaggtgtttctacagttggtggcagagttcaaacgtctgggc
tcaacagtggtgtatggaaacttcaacaggatcctcctgtgcaccaaaaaacggaggatc
gacgacgccattggctacgtggaatacatcaccaacagtatccactccagggaaatcttt
cactccttgtctattaccttctcccgctgctgggagtttgtgctctggatggatccagct
aactacggtggtgtgaagggcaaacttccctctagcctcctgtttggagaggacgcagca
aaagacaagagaaagagacaagaggaaggagatgatgaggggagtgaagatgaagaggaa
aacgaggtggaggaagaggacggtgatggagagacagatgaggtggaggagctgatcgag
agcaactggaacatcatgcagtatttgccccaaactgcatcctgtcagaaatacttcctc
atgatcatctccgcatacatcgcagcggtctaccacagcatgaaagaggagctgagacgc
aacgctccaggggccacgccagtcaagaggcgtgcagatagccaggcttctcagcaggca
gtgggggatttaagtgctcttcctggaatgatctccttctctcaggagtatgtgtccagt
gagctgacccaaaactttttcaccatcactcaaaaaatccagaagaaggtgacgggtacc
aggagtgtgacccagccctcagaaatgttccctgtcctgcctggatcccatctgccactc
aacaaccctgcactggagtttattaaatatgtctgccaggtcctttcactggacgccaac
atcgtgaaccaggtgaacaagctgaagagagacctcctgcgtcttgtcgatgttggagag
ttttcagagaacgcccacttccgtgatccctgcaactcctacgtcctgctggaggttatc
tgccaccactgcaacttctgtcgtgacctcgacctttgcaaggacccagcggtcgcacaa
gatggatctgtgctgcctcagtggttctgctcaaactgccaggcgcagtatgagactgag
tctattgagatggctctggtggaggctctgcagaaaaagctgatgagctacactctgcag
gatctggtttgtacaaaatgtaaaggagtgaaggaagcgaacatgcccctgtactgcaaa
tgtgccgggagctttgagctcactttcccagccaagagcttctcagagcagatcatggtg
tttcggagcatagcatcccattacaacatgagcttcctggaggaaacaatcgactggtta
cttgttatgagtccacacatcaaccagagcattcactag
DBGET
integrated database retrieval system
