Halichoeres trimaculatus (threespot wrasse): 141791353
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Entry
141791353 CDS
T11192
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
141791353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
htc04515
]
141791353
Cell adhesion molecules [BR:
htc04515
]
Immunoglobulin superfamily
ROBO family
141791353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_VEGFR-1-like_5th
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
VEGFR1-3_N_Ig-like
Ig_5
Unc5_NetrinR_N
Ig_PDGFR_d4
Fn3_Dep-1_3rd
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
141791353
NCBI-ProteinID:
XP_074527832
LinkDB
All DBs
Position
Unknown
AA seq
1592 aa
AA seq
DB search
MLTAHPPLTLLLMSLLCFNHLQRGHTIEITSDADKHRGIHEIITQTPASDPTSELDNSLG
YKGSRLRQEDSPPRIVEHPSDLIVSKGEPATLNCKAEGRPYPTVEWYKDGERVETDRDNP
RSHRMLLPTGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAISHNASLEVAILRDDFRQN
PVDVMVAVGEPAVLECQPPRGHPEPTISWRKDGANLEGRDERITIRSGKLMITNTRKSDA
GKYICVGTNMVGERESEIAELTVLERPTFIKRPSSVVVMADESVEFYCVVQGDPVPTVRW
RKDDSDLPKGRFEILEDHTLIVRQVTSSDEGSYTCVVENMVGKSEASATLSVHVPPAFTT
RPRNQVVAVGRTVTFQCEATGNPQPAIFWQREGSESLLFSYQPPELFSRQSVSQMGSLTI
TDVQRSDGGFYSCQALNIAGSVITKALLEVTDSGSEHPPPVIRQGPLNQTVPVDSTVVLG
CQTAGSPPPTVHWKKDGVVVSPVDSRMSITNTGSLEIRYTKLGDTGFYTCVASSSNGEAS
WTAHLQVEEFGVIVQSNQPIDPNLMPSAPTKPAVTDISRTSVTLSWKTTPGAGAPPTSYL
IEAFSYTLGSRWVTLSEHIKTQTFVLKNLKPGTVYLFMVRAVNDYGLSDPSPISDSVRTQ
ADSSSTMQGVDHRHIQRELGDVVIHLHTPTVLSSSAVRVHWMVEQQSPYIQGYKVLYRQS
AGHGQPEGQWSFLEVRATREDGVVIGQLKRGAIYEFKVRPFFDEFQGADSEVKVVRTLEE
APSKAPQGVTVTKSDANGTAILVAWKPPPEQEEAGVIQEYKIWCLGNESRYHVNQSVDGS
TFSVLIPSLAPGIRYSVEVAASNGAGPGVKSDVTFFQLDSAGQMMDISEERDTLSQISDV
VRQPAFIAGIGATCWLVLMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFSPTVAYQRGD
SACSAGRPGLLSMGEPLNQLWLPDNWPNACANHKDCSINCCNNGNGTSDSNMTTYSRPAD
CIANYGNHPENKQGGQLGSETAIYSDVNLSNKLNEIKTFTNSNLGYVSPGGDYEPIPYAT
TQLIQASIKNKAATGGAAAEPLDMPCWNKPPNPPPIPKEMAAQMQYNIIEKNMLNKDHLQ
GSEGMIHPKTIPYNQMNRDHSTGGSHHSSDRGSNSTSGSQNQKKGTRAPKLPKHNAVSWG
DAPPPPHANAWDCDGYSLPIDRGFDPGERIEGCPTPPVRGAASSPTEGSYSHPSSTAAQG
GLSNGTEHLSHPRPLSPPHTYSSIPLCLDTDGQEEDDEEEEAEEETDAELPESHYSQQQH
HNEQKHKHQLHHHSAHKLLLHGLEQTPASSTGELDRSVTGSMVNSWGSASEDNISSGRSS
VVSTSEGSFFTDGDFNQAVASSRDIVGLRMCRYPEESGRRLPRPSSPMSTDSNMSPAITQ
RRPRRHKQNQAGQQDYEPKDIFNDDSCMPLSFSSQMSHGDYKVRGATLPRMGSGEARGRR
GSTGTHRVKEVAPNEERDRQDKHKTPAGGKGSSKSRQHSELGDVLLYSRPSFPSGQVQRE
PDGANSTSFMSCGDSRTKQRGQMPPTGQVDES
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgctaactgcacacccacccctcactctactcctcatgagcctgctctgtttcaaccac
ctgcagcggggccacaccatagagataacatcagatgcagataaacacagagggatccat
gagatcatcacacaaacacctgcatctgaccccacatctgagctagacaacagtttggga
tacaaagggtctcgtcttcgccaggaagactcccctccccgcattgtggagcacccctct
gacctcattgtgtccaaaggggaaccagccactctcaactgcaaggcagagggccgcccg
taccctacggtggaatggtacaaagatggggagcgcgtcgagacggatcgcgacaatccc
cgctcccaccgcatgctgctgcccaccggctcactcttcttcctacgcatcgtccacggg
cgcaggagcaaacctgatgatggcagctacgtgtgcgtggcccgaaactatctaggccag
gctatcagtcacaacgcatcgctggaagtagccattttacgggatgacttcagacagaat
ccagtggacgttatggtggccgtgggtgagcctgcagtgctggagtgccagcctccccgt
gggcacccagaaccaaccatttcctggaggaaagatggggcaaacttggaaggcagagat
gaacgcatcacaattcgcagtggcaagctgatgatcaccaacaccaggaagagtgatgcg
gggaaatacatctgcgttggaacaaatatggttggagaaagggagagcgagatcgctgag
ctcacagtgctagagcgtccaaccttcataaaaaggcccagcagtgtggtggtaatggca
gatgagagtgtggagttttactgtgttgttcaaggagaccctgttcccactgtccgctgg
aggaaggatgattctgacctgcctaagggcaggttcgaaatcctagaggaccatactttg
attgttcgccaagtgacctcttcagatgagggctcctatacatgtgtggtggagaacatg
gtcgggaagtctgaagcatctgccacgctctctgtacacgtgcccccagctttcaccaca
cgccccaggaaccaggtggtggcagtgggcaggacagtcaccttccagtgtgaagccacc
ggcaacccacagcctgctatcttctggcagagggagggcagcgagagtctcctcttttct
taccaaccaccagagctcttcagccgccagtctgtctctcagatgggcagtctgaccatt
actgatgttcagcgctctgatggcggcttctacagctgccaggctctcaacattgccggc
agtgtcattaccaaagcgctgctggaggtcacggactctgggtcagagcaccctcctcct
gtgatcagacagggtccactcaatcagaccgtgcctgtggacagcacagtggtcctgggt
tgtcaaacagctggttctccacctcctacagtccactggaagaaggatggtgtagtggtg
tctcccgtggactcccgcatgtcaataaccaacacaggatccctggagattcgctacact
aagcttggggacacaggcttctacacttgtgtagcttcaagttccaatggagaggcgtcc
tggactgcacacttacaggtggaggagtttggagtcattgttcagtctaatcagccaatt
gacccaaacttgatgccaagtgctccaaccaaacctgcagtgactgacatcagccgcacc
tccgtcactctgtcctggaaaacaacccctggtgctggagcgccacctacatcttatctt
atcgaggcattcagctacacgttgggcagcagatgggtgactctctctgagcacataaaa
acacagacttttgtcctgaagaacctgaagcctggaaccgtctacctcttcatggtcaga
gcggtgaatgattacggcctcagtgaccccagtcccatctctgactcagtcagaacgcag
gcagacagcagctccaccatgcagggagtagaccaccgtcacatccagagggagctcgga
gacgttgttatccacctgcacacaccaactgtgctttcatcctctgctgtcagggtgcac
tggatggtcgagcagcagtccccttatatccagggttacaaggtgctctacaggcagtct
gcagggcacggacagccagagggccagtggagtttcctggaggtacgagccacacgggag
gatggggtggtgatcggtcagctgaagagaggagccatctacgagttcaaagtgcgcccg
ttctttgatgaatttcagggagctgacagcgaggtgaaagtggtcaggacgttagaagaa
gcccccagtaaagcaccccagggtgttacagtgacaaagagcgatgccaatgggactgca
atcctggttgcttggaaaccgcctccagagcaggaggaggctggagtcattcaggagtac
aagatctggtgcctgggtaacgagagtcgctatcatgtcaaccagtccgtcgatggctcc
accttctccgtgctcattcccagtctggcaccaggaattcgctacagtgtggaggtggcg
gctagcaatggtgcaggccccggagtcaaaagtgatgtcactttctttcagttagactct
gctggtcagatgatggacatcagtgaggaaagagatactctttcacagatctcagatgtg
gtgagacagccagcttttattgctggcattggcgccacctgctggctagtcctgatgatt
ttcagcgtgtggctctaccgccaccgcaagaagagaagtggcctcagcagcacgtacact
ggcattcgtaaagttccatcatttaccttttcaccaacagtggcttatcaaagaggagac
tctgcatgcagtgctggcagacctggccttctcagcatgggagaacctctaaaccagctg
tggctgccagacaactggccgaatgcatgtgccaatcacaaggactgtagcataaactgc
tgcaataatggcaacggcaccagtgacagcaacatgacaacatacagccgaccagctgac
tgcattgcaaactatggaaaccatccagagaacaaacagggcggacagcttggttctgag
acagccatttatagtgatgtgaacctctccaacaagctgaatgagattaaaacattcacc
aactccaacttgggctatgtgagtcctggaggagattatgagcccataccgtacgccacc
acacagctcatccaggccagcattaagaataaagcagccacaggcggggctgcagcagag
cctctggacatgccctgctggaacaagcctcccaatccacctccaatacccaaggagatg
gcagcacagatgcagtataatataatagagaaaaacatgctaaataaagatcatctgcag
ggaagcgagggaatgatccatcctaaaactatcccctacaaccagatgaacagagatcat
agcacaggaggctcacaccacagctcagacagaggcagcaacagcacctcagggagtcag
aatcaaaagaagggaacgcgggccccaaagctaccgaaacataatgcagtaagctgggga
gatgccccacctcctcctcatgccaatgcctgggactgtgatggctatagcctaccaata
gatagaggttttgatccaggggagagaatcgaaggctgcccgactccaccagttagagga
gcggcctcatcccccaccgaggggtcctacagtcacccatccagcacagcagcacaggga
ggcctgagcaatggaacagagcacctcagccatcctcgccctctgtccccacctcacacc
tacagctccatccccctctgcttggacactgatggacaagaggaagatgatgaggaggag
gaagcagaggaggagacggacgctgagctccctgaaagtcactacagccaacaacaacac
cacaacgagcagaagcacaaacaccagctgcaccatcactccgcacacaagctgctgctc
catggactggagcagaccccggcctccagcaccggggaactggaccgatcggtcacaggc
tcaatggtgaacagctggggctcagcatccgaggacaacatctcatcaggcaggtccagt
gttgtcagcacctcggagggatctttcttcacagatggcgatttcaaccaggctgttgcc
tcttcacgggatattgttggccttcgcatgtgcagatacccagaggagtcaggccggcgg
ctcccacggcccagcagccccatgtccacagacagcaacatgagtcctgcaataacacag
agaaggcccaggaggcataaacaaaaccaggcaggtcagcaggactacgaacccaaagac
atcttcaacgatgactcctgcatgcctctgagtttctccagccagatgtcccacggtgac
tataaggtgaggggagccaccctgcctcggatgggctctggggaggctcgaggtcgacgt
ggcagcactgggactcacagggtcaaagaggtggctcctaatgaggagagagatagacag
gataagcacaagactccagccggaggaaagggaagcagcaaaagccgacagcactcagaa
ttaggggacgtcctactgtacagtcgtccctctttcccatcaggtcaagtccagagggag
cctgatggcgctaattcaaccagctttatgtcatgtggagactcgaggaccaaacagaga
ggacagatgccacctacaggacaggtggacgagtcctga
DBGET
integrated database retrieval system
