Halichoeres trimaculatus (threespot wrasse): 141791683
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Entry
141791683 CDS
T11192
Symbol
ddx46
Name
(RefSeq) putative ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141791683 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
htc03041
]
141791683 (ddx46)
Enzymes [BR:
htc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141791683 (ddx46)
Spliceosome [BR:
htc03041
]
Complex A
U2 snRNP components
U2 related factors
141791683 (ddx46)
Complex B
141791683 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
141791683
NCBI-ProteinID:
XP_074528409
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MGRESRYIRHYRKRSASRGRSGSRSKSRSPDKRSKKDDRDRSRRERSRSRERRRSRSRDR
KRARRSRSRDRRRTRSRERRRSGSRSRARRSRSASPSKSRRPEEKPRSKEKDNIDPVSEK
KKVKEEKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQ
GKKWSLEDDDDDEEDVSAPMEADDDEDGEGKGENRDKDMKEEKMEDGDKSETLKEQQAEE
DDVDPLDAYMEEVKQEVKKFNMGGVKGNDKKGAMTVTKVVTVVKTKKGPHTHKKKGELME
NDQDAMEYSSEEEEVDLQTALTGFQTKQRKILEPVDHGKIQYEPYRKNFYVEVPELARMS
QEDVNAYRLELEGITVKGKGCPKPIKTWVQCGVSMKILSAMKKHSYEKPTPIQAQAIPAI
MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECK
KFSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYV
VLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPLEVQVGGR
SVVCSDVEQHVLVIDEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPC
MSLHGGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHR
AGRTGRAGNKGYAYTFITEDQVRYAGDIIKALELSGAPVPSELEQLWASFKDQQKAEGKI
IKSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKR
VKDLSAPGATPGATGVVAATAAVPGGLPGLGPTSAGNIQKLEMAKRLALKINAQKNLGAE
AQDVMQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQAET
VKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYL
AIESANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggggcgagagtccaggtatatcagacactacagaaaacgctcagcgtcacggggacgc
tcaggtagccgatcaaagagtcgctccccggataaacgctccaagaaagacgatcgagac
cgaagcaggagggagcgctcacgaagccgggaacgtcgcaggtcccggtccagagacagg
aaaagagccaggcgctccaggagcagagacaggaggaggaccaggagccgagagcggagg
aggtcgggcagcaggagccgagccaggaggtccagatctgctagtccaagcaagagcagg
aggccagaagaaaagccaaggagcaaagagaaagacaacatcgatcctgtgtctgaaaag
aagaaagttaaggaagagaaagaggatgaaaaagttgaggatcaggactttgaccagaac
aagctggaggaggagatgaggaaaagaaaggagcgtgtggagaaatggagggaagagcaa
aggaagaaggccatcgaaaacatcggagagatcaagaaggagctggaggagatgaagcag
ggcaagaagtggagtctggaggatgatgatgatgatgaagaggatgtttctgctccaatg
gaagcagatgatgacgaagacggagagggtaaaggcgaaaatagagacaaggacatgaag
gaggagaagatggaagacggtgacaagagtgagactctcaaggagcagcaggctgaggag
gatgacgttgatccactggacgcctacatggaggaggtgaaacaagaggtgaagaagttc
aacatgggaggtgtgaaagggaatgataagaaaggagcaatgacagtaaccaaagtggtg
acagttgttaaaaccaagaaggggccccacacccacaaaaagaagggtgagctgatggag
aacgaccaggatgctatggagtactcctcagaagaggaggaggtggatctgcagacagcg
ctgaccggcttccagaccaaacagaggaagatcctggagcctgtcgaccatgggaagatt
cagtatgagccatatcgcaaaaacttctatgtggaggtcccagagcttgccaggatgtct
caggaggatgtaaatgcgtacagactggaactggaaggcatcactgtcaaaggaaagggc
tgtccaaaacccatcaagacctgggtgcagtgtggtgtgtccatgaagatcctcagtgct
atgaagaagcacagctacgagaaaccaacaccgatccaggcccaggccatccctgccatc
atgtcaggccgagacctcattggcatcgctaaaaccggcagtgggaaaaccatagccttc
ctgcttcccatgttcagacatatcatggaccagagacctctggaggagtctgaaggaccc
atctccgtcatcatgaccccaaccagggagctggctctgcagatcaccaaggagtgcaag
aagttctccaaacctctggggctcagggtggtgtgtgtttacggaggcactggtatcagt
gaacagattgctgagctgaagagaggagctgagatcatcgtgtgcacgcccggcagaatg
atcgacatgttgggggccaacagcggtcgagtgaccaacctgcgaagagttacgtacgtg
gttttggacgaagcggacaggatgtttgacatgggctttgagccacaggtgatgcgtatt
gtggacaatgtgcgtccagatcgccagactgtcatgttctcagccaccttccccagagcg
atggaggcgctggctcgaaggattttatccaagcccctcgaggtccaagtgggaggtcgc
agtgttgtctgctcggatgtggaacagcatgtgctggtgatagacgaggacaagaaattc
ctcaagctgctggagattctgggtcactaccaggagaagggttcggtcatcatctttgtg
gacaaacaggagcatgcagatgggctgctgaaagacctgatgaaagcatcgtatccttgc
atgtcactccatggaggaatcgaccagtacgatcgagacagcatcatcaatgacttcaag
aacggagcgtgtcgtctgatggtggccacctctgtcgcagccagaggcctggatgtcaag
cagctcatcctggtggtcaactacaactgtcctaaccactacgaagactacgtgcacaga
gcgggacgcacgggccgagcaggcaacaaggggtacgcctacactttcatcacagaggat
caggttcgttatgctggtgatatcatcaaagctttagagctgtctggtgctcctgtccca
tctgaactggagcagctctgggcctctttcaaagaccagcagaaagcggaaggaaagatc
attaagagcagcagcggcttctcagggaaaggtttcaagtttgatgagacagagcacgcc
ttagccaacgaacgaaagaagcttcaaaaagccgctcttggacttcaggactcggatgat
gaggacggcgctctagacatcgaggagcaaatagaaagcatgttcaactccaagaagagg
gtgaaggacctgtctgcaccgggggcgacccctggtgcgaccggagttgtagcagccacg
gcagctgtacccggagggctgccaggtcttgggccaacatctgctggaaacatccagaaa
cttgagatggcgaagaggctggcgcttaagatcaacgctcagaagaacctgggagctgag
gctcaggatgtgatgcagcaggccaccaacgccatcctgcgaggtggtaccatcatgacg
ccctccgtttctgctaaaaccatcgccgagcagctggcagagaagatcaacgccaaactg
aactacacacccgtggagaagctggaggaagagcggcaggcggctgaacaggccgagacc
gtcaagagatacgaggaggagctggagatcaatgacttccctcagactgccaggtggaag
gtgacatcgaaagaagctttgcagaggatcggcgaatactctgaagctgccatcaccatc
agaggaacgtatttccctccaggcaaagagcccaaagagggagagcgaaagatctacctt
gctatcgaaagtgcaaatgaactggctgtgcagaaagccaaaacagagattacacgcctg
atcaaggaggagctcatcagattacaaaattcctaccagccaacgagcaagggtcggtac
aaagtgttgtag
DBGET
integrated database retrieval system
