Halichoeres trimaculatus (threespot wrasse): 141791907
Help
Entry
141791907 CDS
T11192
Symbol
pcdh1a
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
141791907 (pcdh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
htc01009
]
141791907 (pcdh1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
htc04515
]
141791907 (pcdh1a)
Protein phosphatases and associated proteins [BR:
htc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141791907 (pcdh1a)
Cell adhesion molecules [BR:
htc04515
]
Cadherins
Protocadherins
141791907 (pcdh1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
He_PIG
Syndecan
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
141791907
NCBI-ProteinID:
XP_074528711
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MEQSLPVVLFWVLVLHCGSAEGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGS
PYLRVDGKTGDIFTTEVPIDRETLRDCRTLAKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFLANVLTISVPENTIMGALFSIPLAIDRDSDRNGVADYALTAGPDAATL
FGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKVVDGGNPQRYSSALLRVVVTDANDN
APKFEKSTYEAEVSENSPVGHSVLQVRANDSDMGPNGEIEYTLHQAVDPVPRLLRIDRST
GTIYVKGSLDREEINSLSFYVVARDKGPQPKSSKAFVTIEVTDQNDNAPAVEIRGIGLVT
HSEGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSSDNKRKY
FLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTLFEVDFA
EENQPGEKVLDVLASDADSGTNAELLYNIVADSSIKGLFEIDPNTGEVRARSPLDREHKE
RYEFRVTAADKGSPVHKGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTV
LDVDKGENARVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDAGEPPRS
SYVGVTINVLDENDNDPVVTKPSNSSYKRLSPLASPDSHVEIVEAEDLDSGPNAELVFSI
AGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPARHATALVHIYVNETI
SNVSLVEALVGHSLYTPLDRDIAGDPDNGFAAQRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQAPKNAKGKRGRKGKPQKSPKPLGEEEEVSLQKSLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQPKYNNKQHPHRRVTFSTTNPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTNECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSARLGGEEQH
RPRLPPSRSAYSNSGHEASQDCPLEEMPLSVASEFPPTSPSTHTPKREIYL
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggaacagagtttacctgtagtgctgttttgggtcctggtgctgcactgtggctctgct
gagggcagcatcctgtatcgggtccaggaggagcagcctccaaacaccctcattgggagc
ctggcagcagatcagggactcccagattctggtcatctctacaagctggaagtgggttca
ccttaccttcgtgtggatggaaagactggagacattttcaccacagaagtccccattgac
agggagaccctgagggactgtcgaaccctggctaagggtaagccctgctacctggagttt
gaagtatcagtgacagacctgattcaaaaccagagccctcgactcatcgaaggacgaatt
gaagtacaggacatcaatgacaacactccacagttcctcgctaatgtgctcaccatctct
gtccctgaaaacaccatcatgggggcactgttctccatccctcttgccatagacagggac
tcagacaggaatggtgtggcagattatgccctgacagcaggaccagatgctgcaaccctt
tttggcttacaggtggctgacgacagggggggaaagctaccgcagctcatcgtcctgggt
aacttagatcgtgagttaaaggattcgtatgatctcacaatcaaggtggtggatggagga
aaccctcagcgctacagcagtgctttgctgagggtggtcgtcactgacgccaatgacaac
gctccaaagtttgaaaagtctacatatgaggctgaagtgtctgagaacagtccagtgggg
cactctgtgttacaggtcagagcaaatgactccgacatgggtcccaatggggaaattgag
tacacccttcaccaagctgtggacccagtaccaagactcttgcggatcgatcgctccact
ggcaccatatatgtcaaaggatcactggacagggaggaaatcaatagcttgtctttctat
gtggtggcaagggataagggtcctcaacctaaaagctccaaggctttcgtaaccattgag
gtgactgaccaaaacgacaatgcaccagctgtggagattcgtgggattggcctcgtgaca
cacagcgaaggagttgctaacatctccgaggacatgccagtcgggacggctgttgctttg
gtgcaagtgtctgataaggatgagggcgagaatgctgtggtcacttgcgtagtcgcgggc
gatgtgccctttcaactccgtcctgccagtgactcgtccagtgacaacaagagaaaatat
ttcctacagaccactactcctcttgactatgaaagggttagggattaccgggtggagatt
gtggctgtggattctggaaatccagctctctctagtacaaactctttaaaagttcaggtg
actgatgtgaacgataactctccagtattctccccgacgctatttgaggtagattttgct
gaagaaaaccaaccaggtgaaaaggtcttggatgttttagcttcagatgctgacagtggc
accaatgcagaactcctgtataatattgtggcagactcatcaatcaaaggtctgtttgag
atcgacccaaatacaggggaagtaagagccagaagcccccttgaccgtgagcacaaagaa
cgctatgagtttcgtgtcacagcagcagacaaagggtccccagttcataaaggaacagca
acagttgttataaaagtccttgatcgcaatgacaatgaccccaagttcatgctcagtggc
tacagcttttcagtcctggaaaacatgcctcccctcagtccagttggtatggtgactgtt
cttgacgtcgacaaaggtgagaatgctcgcgtacatctctcagtggaacccgacggcggc
aagtttgttgttcaaaatggcacaggcaccattctgtcaagcatctcgtttgatagggag
aaagaaagcagctacactttccgtctcaaagcagtggatgcaggagagcctcctaggtca
tcatatgttggcgtaaccatcaatgtgcttgatgaaaatgacaacgaccccgtggtcacc
aagccctccaattcctcctacaaacgtttgtcacctctagcttcccctgatagccatgtt
gagatagtggaagctgaagacctggacagtgggcccaatgcagagctggtattcagtatt
gctggtgggaacccttaccaattattccgcatctctccatccagtggggagatcactctg
gctaaggaaatgacccgaaaacacggtggactacatcgcttagtagtaagggtcagtgac
agggggaagcctgcacgtcatgccactgccctggttcatatttatgtcaatgaaaccatt
tcaaatgtcagcttagtggaagcactagttggacacagtctttacaccccactggacagg
gacatagctggtgatccagataatggatttgctgcacagcgtagtaacattttgtttggg
agccttgcaggagtggcaggtgttgtcatgttgatcttggttgtggtgtttattcgacac
cgcatccagagagaaacaaagagtggataccaagctggcaagaaagaaacaaaggacttg
tatgcgcccaaacaggcaccaaagaatgccaaaggcaaaagagggagaaaagggaaaccc
caaaaatctcctaaaccgctcggagaagaggaagaggtcagtcttcaaaagagccttaag
ttcaatctggatggagtcaacgatagccccaggatacacctgcccttaacatattcacca
ggaagtcctgatataggcaggcactatcgctccaactcccccttaccctctatccagctg
caggctcagtctccctcagcctctcagaagcatcaggctgttcaggacctccctgctgcc
aacacctttgtaggaacagggggagacgacaattccaccggctcagaccagtactcagat
tacagctacaagaccagccaacccaagtacaacaacaaacagcatccccaccgacgagtg
accttttccaccaccaacccggtgcaggacctgcaggacgcctctcagcacagctactat
gacagcggcttggaggaatcggagactcccagcagtaagtcatcgtctggccctcgcatc
ggacccctgaccctgcctgaggaccactatgagaggaccactccagatggcagcattgga
gagaccgagcaccctgaaaatgatattcgctccctccctgacgtggcaatgactgggaac
tgtaccaacgagtgcagcgaattgggccattcagacgcctgctggatgcccgggcatccc
tcccctgtacgcaagaccaggaaccccccgaaactctccaccttcgtgccttaccaggag
agagggagcctgggacgcctggccaatgggagcgccaggctgggcggcgaggagcagcac
cggccgcgcctcccgccctctcgcagtgcctattccaacagtggtcatgaggccagtcag
gactgcccgttagaggagatgcccctgagcgtggcctctgagttcccgcccacttcgccc
tccacccacactccaaaaagagaaatctacctgtga
DBGET
integrated database retrieval system
