Halichoeres trimaculatus (threespot wrasse): 141793016
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Entry
141793016 CDS
T11192
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like isoform X1
KO
K12597
protein AIR1/2
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141793016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141793016
03016 Transfer RNA biogenesis [BR:
htc03016
]
141793016
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
141793016
Transfer RNA biogenesis [BR:
htc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
141793016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
141793016
NCBI-ProteinID:
XP_074529425
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MDMDFFFGESSSSEDEAKILFSHQKHQKSCTHAARLSRESSPPLLLAFSTSRPSPVSRVD
SEEEEEDTDQPIEEWMILGGEEQVEDSTIQLNLSYCNSSEEGSGDEDPVVKSKKDTWLVS
EKDKSLHLRYWLPGKSQICNNCNREGHLARSCYYHKKHPVCILCGIMGHIQWDCPDRPCS
SCGLPSHSSRPCERPPVRNQHCQRCGVVGHLSDACPDLWRQYHLTIRLEVPLRPSTVIAL
QNKKCLPYCYNCSKQGHYGYECTKRISGTFLSLPYVCHYDTMDDILSHHTRDHRGTKELI
RSGSLLFSNQKSDTPTQECGEENQSVKEKSRTKQEWYNQSARKKTWPERRRERREVKRLR
REAQARREGGVFGRPLRNYDEEDHPSDPFRSPFLDHKKTPPPPQKMKGRDEAGGRRSRKS
REAERWKKRGGLKHGDLHPYVDICENLLSPKQRVRHRRK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggatatggatttctttttcggggagtcaagtagttcagaagacgaggcgaagatcctg
ttcagtcaccaaaaacaccaaaagagctgtacacatgctgcacggctcagcagggagagc
tctcccccgctcctgttggcgttcagcaccagcagacctagtcctgtttccagagtagac
tcagaggaggaggaggaagatactgaccaacccatcgaggagtggatgatccttggagga
gaggagcaagtcgaggactcaacaatccagctcaacctgagctactgtaacagctctgag
gaaggctcaggggatgaagatccggttgtgaagtcaaagaaagatacctggcttgtatca
gaaaaggacaagtctctgcacctccgctattggttgcctggtaaatctcagatctgtaac
aactgcaatagagaaggacatcttgccagaagctgctactatcacaagaaacatcctgtc
tgcatcctttgtgggatcatgggccacatccagtgggactgcccagaccgcccctgctct
agctgtggactgccttcacacagctccaggccctgtgaaagacccccagtgcggaatcag
cactgccagcgctgtggagtggtgggacacctttctgatgcctgccccgatttgtggaga
caataccatttgactatccgattagaggttcctctcaggccatcaacagtcatcgccctc
caaaataaaaagtgcctaccttattgctacaactgctcaaagcaaggacactatggttac
gaatgcactaagaggatcagcgggacgtttctctctcttccctatgtttgtcattatgac
acgatggatgacatcctcagccatcacaccagagaccacagaggaaccaaagagctcata
agaagtggatccctgcttttctcaaaccagaagtctgacacaccaacacaggagtgtggt
gaggagaatcagtcagtcaaagaaaagagcaggacaaagcaggaatggtataaccagtct
gcaagaaaaaaaacgtggccagagaggcgcagagagcgacgagaggtcaagaggctgagg
agagaggctcaggccagacgagaggggggagtatttggaagacctctgaggaattatgat
gaagaagatcacccctcagaccccttcaggtctccttttcttgatcataagaagacccca
cctcctccccaaaagatgaaggggagagacgaagcaggtggcaggaggagcaggaagagc
agagaagccgagagatggaagaagaggggagggttaaaacatggggatttacatccatat
gttgacatatgtgaaaaccttctttccccaaaacaaagagtacgtcacagaagaaaatga
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