Halichoeres trimaculatus (threespot wrasse): 141793386
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Entry
141793386 CDS
T11192
Symbol
tsen2
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
htc03016
]
141793386 (tsen2)
Enzymes [BR:
htc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
141793386 (tsen2)
Transfer RNA biogenesis [BR:
htc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
141793386 (tsen2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Cwf_Cwc_15
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
141793386
NCBI-ProteinID:
XP_074530160
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MQAEFRAPRRRIRVFEEYEAPLPVSRSPEESTHFRAELINQHVLVCHPDHIQKIHNQGYF
GKGILSRARPDHGISDQWEQHEGLMLPVVTQSRYDELLRWAGSALSAQGLDGEAVRQTLL
RLSQSVEVEDVRREMGGGENGLKREEKKEEEPEAEGGVCSQTKRAPVKSEDEPEPKRSCR
PEPQDASPDHDLNPSSVRESDSNHDPSSDSDSDHGGDPDPLVPGPGFVLVVSDNKECEDI
REVRRSPLALTEYLQLSLEEVXCHLSLKMTLFMSSPLIGQEPLSVLQLWQKLRSLQPNFI
SSFAAYQHFRSRGWVPKMGGGAKYGVDLMLYRKGPPFYHASYSVVIERVDDEFKGSGLRP
FSWRSLAALSRITCNVSKELMFCYIIYPIDLSEAELDSPACLSKLKVQEVIVSRWVSSRE
RAEQDDI
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggagtttcgagctccccggagacggattcgcgtcttcgaggagtacgaggct
ccgctgccggtgagccggagcccagaggagagcactcatttcagggcagagctcatcaac
caacacgtgctggtctgtcatccggaccacatccagaagatccacaaccagggttatttt
ggtaaaggcatcctgtccagagccagaccagaccatggcatctctgaccaatgggagcaa
catgaaggtctgatgcttccagtcgtcacacagtccaggtatgatgagctcctcaggtgg
gcgggctcggctctctctgctcagggattggacggagaagctgtccgtcaaactctgctc
agactctcacagtcggttgaggtggaggatgtgagaagagagatgggaggaggggagaac
ggactgaagagggaggagaagaaagaggaggagccagaagcagagggcggagtctgttcc
cagacaaaacgtgcacctgtgaagtcagaggatgagccggagcccaagaggagctgcagg
ccggagccacaggacgcgagccctgaccacgacctgaaccccagctcagttagggagtct
gactctaatcatgatcccagctcagactcagactctgatcatggtggagatcctgatcct
ttggttccaggtcctggttttgtcctggtggtgtcagacaataaggagtgtgaggacatc
agggaggtgcggcggtctccactggctctcacagagtatttgcagctcagtctggaggag
gtgtgatgtcacctttcactaaagatgaccttatttatgtcctctcctctgattggtcag
gagcccctgtcagttctccagctgtggcagaaactcaggtccctgcagcccaactttatc
agctcctttgcagcctaccagcacttccgaagcagggggtgggtccctaaaatggggggc
ggggccaagtacggcgttgacctcatgctgtacaggaaaggcccacctttctaccatgcc
agttactcggtggtaattgagcgggtggacgatgagttcaagggctcagggctgcgtccg
ttttcttggcgctctctcgctgctctcagcagaatcacctgtaatgtgtccaaggagctg
atgttttgttacatcatctatccaatcgacctatcagaggcagagctggactcacctgcg
tgtctaagcaaactgaaggttcaggaggtgatcgtcagcaggtgggtttcctctagagag
cgcgcagagcaggacgacatctga
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