Halichoeres trimaculatus (threespot wrasse): 141793408
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Entry
141793408 CDS
T11192
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
141793408
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
htc01009
]
141793408
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
htc04515
]
141793408
Protein phosphatases and associated proteins [BR:
htc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141793408
Cell adhesion molecules [BR:
htc04515
]
Cadherins
Protocadherins
141793408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
141793408
NCBI-ProteinID:
XP_074530200
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MAALRWKVLLFLAVLLFVSCKATPTDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE
VGSPYLRVDGKTGDIYTTEIPIDRETLRDCRNLFEGDKCFLEFEVSITDMVKGIGTGPRL
IEGRIEVLDINDNTPQFSSPILTLSIPENTHVGALFSIPMATDRDSGTNGVAEYSLSTGP
DADQLFTLQVAMDSGEKLPQLVVMGNLDREKKDSYDLTIRATDGGKPPRAASSLLRVTVT
DQNDNAPKFERSHYEAELPENSPLGHSVLQVRANDADTGTNGEIDYSLHQASETVQRLLR
IDRSTGIIYVKGLVDREEENFLKFFVVAKDRGPNSKTSKVLVTIIVKDQNDNAPAIEIRG
IGLVTHQNGVANISEDMPVGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND
RKRKYFLQTTTLLDFERVKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPNFSPASL
EVDFAEGNQPGDKVVDVVATDADIGTNAELTYSIIELSANALFEIDSSSGAVRVRNVLDR
EETEGYEFRVAAADKGVPSKTGTATVTINVLDRNDNDPKFMLSGYSFSVIENMAPLNPVG
VVTVTDSDKGENARVNLFVEPDNGKFVIQNGTGTILSHISFDREKESTYTFRLKAVDSGD
PPRSSYVGVTINVLDENDNAPYVTKPANSSYTYMSPSTQTETRVEVVEAEDIDSGLNAEL
VYTITGGNPYGLFHISPSSGEITLAQEFSGKHTGLHRLVVRVSDKGKPPRHTTALVHVFV
NDTRSNVSLIEALVGHSLYTPLDRDIAGDPNYAHAQRSNILYGSLAGIAGVILVIVAVVV
IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQK
GLKFNLINDTVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQLPHRRVTFSTANQAQDLQDASQ
HSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVA
MTGNCTHECTEFGHSDSCWMPGQPSPTRKVSKNAPKLSTFVPYQEMDGQEQLMANGSPKP
MAMEERGTGGGGSSSKVANMRFMTPYSSAYPGGGDSTGKDCGMEEIPLSQAVEYHSATTP
TGQTSKREIYL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgaggtggaaagttctgctgttcctggcagtcctcctgttcgtctcctgc
aaagccacgcccacggacatcctgtatcgggttcctgaggagcagccaccaaacacgctg
atcggcagtttagcggcagaccagggcttacctgacactgggcacctttacaagctagag
gtggggtcgccgtacctgagggtcgatggaaagacaggtgacatctacaccactgagatc
cccattgaccgcgagacgctgagggactgtcgaaacttgtttgagggagacaagtgcttc
ctggagttcgaggtgtccatcacagacatggtgaaaggcatcggcacggggccgcggctg
attgaggggcgcattgaggtgctggacatcaacgacaacacgccacagttctcctcaccc
atcctcaccctctccatccccgagaacacacacgtcggcgccctcttctccatccccatg
gccactgacagagactctggtacaaacggtgtggctgagtactctctgagcaccggaccg
gacgcagaccagctcttcaccctgcaggtggcgatggactcaggggagaagctgcctcag
ttggtggtaatgggcaacctggaccgcgagaagaaggactcatacgacctgaccatcaga
gcgacggacggagggaagccaccgagggcggcctcctctctgctgagagttactgtcact
gaccagaacgacaacgccccgaagtttgagaggagccactacgaggccgaactgccagag
aacagcccgctgggacactctgtgctgcaggtccgagctaacgatgctgacacaggaacc
aatggggagatagactacagcctccaccaggcatctgagaccgtccagaggcttctacgc
attgaccgctcaactggtatcatctatgtgaagggtctggtggaccgtgaggaggagaac
ttccttaagttcttcgtggttgcaaaagatcgtgggcctaactccaagacctccaaggtc
ctggtgaccatcattgtcaaggaccagaatgacaacgcacctgccatcgaaattcgaggt
attggcttggtgacacaccagaatggcgtcgccaacatctctgaggacatgcctgtaggc
acacctgtggcgctggtccaggtgtcagaccgggatgagggggaaaacgctgtagtgaca
tgcgtggttgccggtgatgtcccattccagctccggcctgcgagtgagtctgcaaatgat
cgtaagaggaaatacttccttcagacaacaacccttctggatttcgagcgcgtcaaggat
tacaggattgaaattgtcgcagtggattctggaaacccagctctctccagcaccaactcg
ctgaaagtccaggtcacagatattaacgacaacacgcccaacttttccccagcatcactc
gaggttgactttgcagaagggaaccagccaggtgacaaagtggtggatgtcgttgctaca
gatgcagatataggcactaatgcagagctaacttacagcatcattgagctctcggccaat
gcgctttttgaaatagattccagcagtggagcggttcgggtgaggaatgtgttggaccgg
gaggaaactgaggggtatgagtttcgtgtggctgcagcagacaagggcgtcccaagtaag
actggcactgccacggtgacaatcaatgtcttggaccgcaatgacaacgaccccaagttt
atgctgagtggctacagcttctctgtcattgaaaacatggctcctctcaatcccgttggg
gtcgtcactgtcactgacagtgataagggcgagaatgcccgtgtgaatctgttcgtggaa
ccagacaatgggaagtttgtcatccagaatggcacaggaaccatcctgtcccacatatcc
tttgaccgtgagaaggagagcacttacaccttccgccttaaggctgtggattcaggtgac
ccacctcggtcctcctacgtgggcgtgaccatcaacgtcctggacgagaatgacaatgcc
ccttatgtcaccaaaccagccaactcctcctacacgtacatgtcacccagcacccaaaca
gaaactcgtgtggaggttgtagaggctgaggacattgattctggactcaatgcagagctg
gtctacaccatcacaggcggaaacccctatggtctgttccatatctcacccagtagtggg
gagataacactggcacaggaattctctggaaaacacactgggctgcatcgcctggtggtt
agagtcagcgacaaaggcaaacctccacgtcacaccaccgctttggtccacgttttcgtc
aatgacaccaggtccaacgtctccctcattgaggctctggtgggacacagcctctacacg
cctctggacagggacatcgccggggatcccaactacgcccacgctcagcgcagcaacatc
ctgtacggcagccttgcaggaatcgctggcgtgattctcgtcattgttgccgtcgttgtc
atcaggcaccgcttgcagaaggacacaaagagcggttatcaggctggaaagaaggagagc
aaggatctttacgctccgaagcaaggcccgaaaaatgggaaagggaaaaagagcaaaaag
gggaaagctcccaaaccggcaaagccactggaagaggacgaggaggccagcttacagaaa
ggcctgaagttcaacctcatcaatgacacggtgaacgacagccccagaatccacctccca
ctcaactacccaccaggaagccccgacttgggccgccactaccgctctaactctccctta
ccttcaatccagctgcagccacaatccccctctgcctccaagaagcaccaggcagttcag
gacctccccgccaccaacaccttcgtaggaacaggcgacaacaactccacaggctccgac
caatattcggattacagctacaaggccaacccacccaaatacagcaacaaacagctcccc
caccgccgagtgaccttctccacagccaatcaggcacaggacctgcaggacgcatcccag
cacagctactacgacagcggcctagaggagtcagagacgcccagctccaagtcatcgtca
gggcctcggatcgggcccctggcgctgccggaggaccactacgagcggactacacctgac
ggcagcatcggcgagatggagcacccggagaacgacctcaggcctcttcccgacgtggcg
atgaccggtaactgcacccacgaatgcaccgagtttggccactccgactcctgctggatg
cccggccagccttccccgactcgcaaggtgtccaagaacgcccccaagctgtccaccttt
gtgccttaccaggagatggatgggcaggagcagctgatggccaacggcagcccaaagccc
atggcgatggaggagcgcgggacgggaggtggcggaagcagctccaaagtggcaaacatg
cggtttatgacgccctatagcagtgcctaccctgggggcggagactccaccggtaaagac
tgtgggatggaggagatcccgctgagccaggcggtggagtaccactcagccaccaccccg
accggccagacctccaagagggagatctacctgtga
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