Halichoeres trimaculatus (threespot wrasse): 141793550
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Entry
141793550 CDS
T11192
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
htc03041
]
141793550
Spliceosome [BR:
htc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141793550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
TPR_16
TPR_19
HAT_Syf1_CNRKL1_C
UTP6_C
TPR_15
TPR_12
HrpB1_HrpK
TPR_21
HAT
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
141793550
NCBI-ProteinID:
XP_074530426
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MAAEGCEEMSGNGELTESSAMEASEVPAPPPTEMEETSEENGSAPEAMTGTDPVSYPMPQ
TTEDEEGELPADFERLWKAAHDNPQDFTSWTDLLQYCEQESHITASRRALEAFLARYPLC
YGYWKKFADLERRAGDNNKAEEVCVQGLQAIPLSVDLWIHYINLLLGTLDMNLPESPVRI
RRVFEDAVAAAGLDFHSDRLWDLYIEWEKEQDNMRNAAAVLDRVLKVPTQLYNTHYDKFK
EHLNSHEPKVVLFQEEYEELRASCRQSQKAERAEQAQEEEAERPPGEEEPATPEGTDTEE
LMQKIREQVLVRRDKVYQDNEGEVRQRWHFEDAIKRPYFHVKPLDRLQLRAWHTYLDWEI
AQLNKDTKTPTPDPNEAATEGSEVTTMPQEQSGESSLATDDYRVRILFERCLIACALYEE
FWIRYSQYLEAQSVDEARAVYKRACEIHLTNKPNIHMHWATFEERHGDLSEARRVLEALE
KTLPGLAVVRLRRAALERRAGQLDQSEALLQEAVAESKEKPTLHAFYSIKLARLLLKVGR
NPSEARRILQEALVISPDNDKLHLNLLELEVSGDPWASAEAVQECVTRALAAPLAPHVKI
LLSQRGLQFAEDYSNSIQTVLSVYEEHQKLLKELGGTKREAENGDEDPEKLIKSEDDSAV
AVSEQAPSTMPHVPITTPPPPVMGDTSSQAGYGSYSSWYQQPQYGSYGYQNTWNYNQGYY
PPS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggctgtgaggagatgagcggcaacggggaactcacagagtcctcagcc
atggaggcttctgaggttcctgcgccgccaccaactgaaatggaagagacatcagaagaa
aatggcagtgctcctgaggccatgacaggtacagaccccgtttcttaccccatgccccaa
accacagaagacgaggagggagagctgcctgcagactttgagcgcctgtggaaggccgcc
cacgacaatcctcaagacttcaccagctggaccgaccttctgcagtactgtgagcaagag
agtcatatcacagcatcacgcagggcactagaggccttccttgctcgctatccactctgc
tacggctactggaagaaatttgctgatctggagcggcgtgctggtgacaacaacaaagca
gaggaggtgtgtgttcaaggtcttcaagcaatccctttaagtgtagatctgtggatccat
tacatcaatctgctgctgggaacactggacatgaacctgcccgagtcacctgtacgaatc
cgcagagtgtttgaggatgcagtagcagcagcaggtctggactttcactcagataggctg
tgggatctttatattgagtgggagaaggagcaggacaacatgaggaacgcagcagctgtg
cttgatagagtcctcaaagtccctacccagctctacaatacccactatgacaagttcaag
gaacacttgaacagccatgaacccaaagtggtgcttttccaggaggagtatgaggagctg
agggcatcttgtcgtcagagtcagaaggcagaacgtgcagaacaagcacaggaagaggag
gcagagagaccgccaggggaggaggagccagccacacctgagggcacagacacagaagaa
ttgatgcaaaagattagagaacaagtgctggttcggagggacaaagtgtaccaggacaac
gaaggagaggtccgccagagatggcattttgaagatgcgatcaaacgcccctactttcat
gtcaagccactagaccgcctccagctgcgggcctggcatacctatctggactgggagatc
gctcagctgaacaaggacacaaaaactcccaccccagatccaaatgaggctgctacagag
gggtcagaagtcacaaccatgccacaggagcaatcaggggagtctagtcttgccacagat
gactacagggtccgtatcctctttgagcgctgcctgatcgcctgtgctctgtatgaggag
ttctggatcaggtactctcagtatctggaggctcagagtgtggacgaggcgcgggctgtt
tacaaacgtgcctgtgagatccacctgaccaacaagcccaacatccacatgcactgggcc
acctttgaggagaggcatggtgacctttcagaggctcggcgagtgctggaggctctggaa
aaaacactgcctgggttggcagttgtccgtcttcgaagagcggctttggagagacgagcc
ggtcagctggaccaatcagaagccttgctgcaggaagcagtggcagagtccaaagaaaag
cccacgctacatgctttctattcaatcaagctggctcgcctgcttctgaaggtgggcagg
aacccgagtgaagcccgcagaattttacaggaggccctggtgatcagtccagacaatgat
aaactgcacttgaacctgttggagctggaagtgtcaggggacccctgggcctcagctgaa
gcggtccaggagtgtgtgacccgagccctagcagctccactggcccctcatgttaaaatc
ctcctctcacaaagaggcttgcagtttgccgaggactacagcaactctatccaaacagtg
ctgtcagtgtatgaagagcaccagaaacttctgaaggagctgggcggaacaaagagagaa
gcagagaatggggacgaggatccagaaaagctgataaaaagtgaagacgactctgctgtt
gctgtatctgaacaagccccgtccaccatgccacacgtccctatcaccacgccccctcct
cctgtgatgggagacacaagctcacaggccggttatggaagctacagcagctggtaccag
caacctcaatatggcagctacggctaccagaacacctggaactacaaccagggctactat
cctcccagctaa
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