Halichoeres trimaculatus (threespot wrasse): 141793908
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Entry
141793908 CDS
T11192
Symbol
pcdh20l
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
141793908 (pcdh20l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
htc01009
]
141793908 (pcdh20l)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
htc04515
]
141793908 (pcdh20l)
Protein phosphatases and associated proteins [BR:
htc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141793908 (pcdh20l)
Cell adhesion molecules [BR:
htc04515
]
Cadherins
Protocadherins
141793908 (pcdh20l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
141793908
NCBI-ProteinID:
XP_074530878
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MGHGTLDNMNWAGLLQNLLLVLHLRQITCDSSVWFSVPEEQEPGALAGSLSEHYPPPYQL
LTQEYLWMDKNTGNFYTTEQKMDREALCPQETKAEECIILHNAIVGPSGDLIQFPVIIED
INDNAPHFENGEIYLRVSEDVTVGTSFLLDDTAQDRDAGYNSELHYHLEDSDGAFSLKVE
GDGSAIMLVVQTALDRETRDLYQMALVASDCGSDPLSATATFVVIVTDVNDNCPSFSPDS
PRNVTIPGDAPKNTLVAQVRASDPDLGLNAAIMYSLSPKVSERAKELFSLDSLTGSIRLT
QDLQCDNSEELLLKVLASSRHCPPADTQVTVTMLPKAHQELTIKIRFIAEHQNQTLVLQE
NQPPTVLAVLELEGDSSFKGSSLSIESEVPFTLNPQNGKYLLSTSKPLDYEMKREHHISV
VVHERSAKGSVIVASRRVIRVMVADVNDNTPQFLQSQYQLEVEENNQPGMLLLQVSALDA
DSGHNGRVTYRLGKHTPTIFNIDSVTGQLSVSASLDREQQGEHRLTVFARDSGSPPLESA
ATVSIRVLDQNDNAPVFLTPHFIFFIPENVPQLTQVGGVGVTDPDEGKNGNTELHVVNSS
GPFVVDNTHGTLRTTTNLDRETQDRYELYLLASDHGHPVTLTSTARVTIFVEDINDNQPL
VILPSSNFSCLTVSPATIAGTMITKIYAIDEDSGLNSEITYTIAAPETVQNHSPFQVDSR
SGNITVAQKLLQKDLGMHHLFVVVRDGGKPAPLYTTVWVNLLVNDSMEPCHLDRAPTWMG
TPDLGQTPSKAPICEAEDARSGQLILFVGLCMILASTCLLVVSAVLYLKQRRGSLRQRKR
GHSEENEIPLRLKNKYYSED
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggactcttgataatatgaactgggctggactgctgcagaatctgctgctt
gtgctccatctccggcagatcacatgcgattcctcagtctggttttctgtcccagaggaa
caggagcctggtgctctggccgggtcacttagtgaacactatccacccccgtaccagctc
ctgacccaggagtatctgtggatggacaaaaacacagggaatttctacaccactgagcaa
aagatggatcgtgaggccttgtgcccccaggagacgaaggctgaggaatgcattatttta
cacaatgccattgtggggccctcaggagacctcattcagttccctgtgatcatagaggac
atcaacgacaatgcacctcattttgaaaatggtgaaatctacctcagggtttctgaggat
gtcacagtggggaccagtttcttactggatgacacagctcaggacagggatgctggatat
aacagtgagctgcattaccacctggaagactctgatggagcgttcagtttaaaagtggaa
ggcgacggctcagccatcatgctggttgtgcaaacagctctggatagagagactcgggac
ctgtatcagatggcgctggtggcctctgactgcggctcagaccctttgagtgctacagca
acttttgtagtcatagtgacagatgttaatgacaactgtccaagctttagccctgacagt
ccacgcaacgtcaccatccctggggacgccccgaagaacaccctggttgctcaggtcaga
gcatcagacccagatttaggacttaacgctgccatcatgtactcccttagtcccaaagtc
tcagagcgggccaaggagctctttagccttgacagcctcacagggtccatcagactgaca
caggacctccaatgtgacaactcagaggagctgctgctgaaagtgttagcaagcagccgt
cactgccccccagcagacactcaggtaactgtaaccatgctccctaaggcgcaccaagag
ctgacgatcaagatcaggttcatagctgagcatcaaaaccaaactctggtgttacaagag
aaccagccccccactgtcttagctgttttagagctggagggtgacagcagctttaaaggc
tcatctctttccattgagagcgaggtgcctttcactttgaacccgcagaatggtaaatat
ctgctttccacatcaaagcccttagactatgagatgaaaagagaacaccatatttctgtg
gtagtgcatgagagatccgccaaagggtctgtgatcgttgcttccaggcgtgtgatcagg
gtgatggtggcagatgtcaatgataacactccacaattcctccagtctcagtatcagctg
gaggtggaggaaaacaaccagcctggaatgctactactacaggtctcagctttggatgca
gacagcggacacaatgggagggtgacctacaggctgggcaaacacacacccaccatcttt
aacattgactcggtgacaggtcaactgtctgtgtccgcctctctggatagagagcagcag
ggtgagcacagactcaccgtgtttgcacgagatagtggctctcctccattggagtcggcg
gccacggtatccatccgtgttctggaccagaatgacaatgcacctgtgtttctaacccct
cactttatctttttcatccctgagaatgttccacagctcacccaggtgggaggtgtaggg
gtgacagacccagatgaagggaagaacggaaacacagagttgcatgttgttaacagcagt
ggaccctttgttgtggataacacccacgggacgcttcgcaccaccaccaacttggaccgc
gagacacaggatcgctatgaactctacctgctggccagcgatcacggccacccggtcact
ctgacatccactgccagagtgactatctttgtagaggacatcaatgacaaccagcctttg
gtgattcttcccagcagcaacttctcatgcctgactgtatctccagcaacaatcgcgggc
accatgataacaaagatctacgcaattgacgaggactcagggctaaattctgagattaca
tacaccatagcggcgccggaaacagtgcagaatcacagcccatttcaggtcgattcaagg
tctgggaacatcactgtagcacagaaacttctacaaaaagacctgggaatgcatcacctg
tttgttgtagtcagagatggagggaaaccagctccactttacacaactgtgtgggttaat
ctgctggtcaatgacagcatggagccctgccatttggacagagcacccacttggatggga
acacctgacttgggtcaaaccccttcaaaggcccccatctgtgaggctgaggatgccaga
tcaggtcagttgattctcttcgtaggtctttgtatgatactggcgtccacatgtttgctg
gtggtgtcggctgttttgtacctgaaacagaggagaggaagtctgcgacagaggaagagg
gggcacagcgaggagaatgagattccactcaggctcaaaaacaaatattactctgaagac
taa
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