Halichoeres trimaculatus (threespot wrasse): 141796484
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Entry
141796484 CDS
T11192
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141796484 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141796484 (edc4)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141796484 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
141796484 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
RMC1_N
Motif
Other DBs
NCBI-GeneID:
141796484
NCBI-ProteinID:
XP_074533741
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MASASNIDIEGATQHLRDILKLDRPGNGADSQSSDGPKMPSFNGELNGLLGAGLLGGTDR
STMSESTRPISTDLSTTQETQIICLSGDDSSTCIPITSNNVEIVASQDSGINSKARGSNK
VKIQPVAKYDWEHKYYYGRLIAVSNSFLAYAIRGANNHAMVRVLSVGSAERSLLKGFTGA
VTDLAFAHLDSSLLGCVDEAGNLMVWQLTCTASKILDQVVVHIQRPEDTPLSSYHRLIWC
PFIQDDNEENQDDTSQTLALLHEDRAEVWDLEVLRANNSSWPIDATDLKEGLITVKGHTQ
RVSEGALSPDGTVLATASHDGYIKFWQIYIEGTQDKPRCLHELRPHGGRPLSCLLFCDNH
KRQDPEVPFWRFLITGADQNQELKVWCTVSWTCLQTIRFSPDVFNSSVLPSLKASLDLSA
EYLILTDVQRKVLYVMELRQDLEKGKATFTAVSEFLLTHPVLSFGVRDVAHSRLRHTEVL
PAEEESESLTTEGTQGSTESKSGIQIKLFCVHTKSLQDVQIWFQPNLGYNSTGFLPHSDS
QDGFAGFSDHLTDQSSDKESGSGSQTDLRSISMLPAPADFLSNSNTSSVAMPKLMTPDAF
MTPSTSVPASPGSSASSLTIVTAISSNSDSTNRALDDVSQSPIRAENNSSSSLALSTSTN
SQRVTSSVLLPGLENLQALVPPSGPHALDGSPALDSPLLPPLASPTRARSPDVISSASTA
MSQDMPEIASQTLQHQRGLVSSLDTSPLSALQTDSMASAASALHLLTSPRTANNSLLPLE
LGGVDGPGSGSVEPEPRLSNTPSLLENALPQENPGAGIGSADNGVSHTPWPAAPDITRET
RNSLRDNGLGDCSRDQESKDRHLSSPYHRRSYHLTHNDSLDAGAEQSDPDDEVASLASSS
GNCGNRSSHRVPVKDWKSSPRASPKLKRKTKKDNSESSQSRQMDSAQMNAEVQDELLMLL
RSQQREITELRGHVEAMQSSILAQVGHVLTAHHEQEQRRLERVIAETQSNQQQLQEQLSQ
QISHALSSALTNRMDKVLREEMKKTVPQTITKSLEPVTGQLNNTITAKLTAVEVTLKENV
NKVVKSKNTTDAIGRAAAEAMQGPIQAAYKDAFQSIVLPVFERGCQSMFQQINDSFKQGT
QEYIQQLESHMKSRKQRELDTRDPIVAQLQQMIDGFQSSTDKLSSTITANVRAEVQHQIQ
MMVGNLQESILSHVQRIVKGEVSLAMKEQQAVVTSSIMQAMRSAAGTPVPTAHLDYQTQQ
ANILQLLQQGQLNQAFQQALSATDLNLVLYVCETIDSQQVFGQHPCPLSQPVLLSLIQQL
SSNLTTRSELKISYMEDAVMNLDHGDPMTRDHMAIVLAQVRPKLFSFMQQDPHSPLSKRA
RRLMMMLQGLVNH
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcttcaaatatagatatcgagggtgctacccagcacctgcgggacatcctg
aaactggaccgtcccgggaatggagccgattcacagtcaagtgatggacccaagatgcca
tcttttaacggagagctgaacgggttattgggagcaggccttttagggggcactgaccgg
tcgaccatgtcagaatctaccagacccatctccacagacctcagcaccacacaagagaca
cagataatctgcctttcaggtgatgatagctccacctgtattcccatcacctccaacaat
gtggagattgtggcgagtcaagactccggcataaacagcaaggcccgcggaagtaacaag
gtgaagattcagccggtcgccaagtatgactgggaacacaagtattattacggcagactg
atcgctgtctccaactctttcctggcctacgccatcagaggagccaacaaccacgcgatg
gtccgtgtcctgagtgttggttctgctgagcgctcccttctgaaaggcttcactggagcc
gtcacagatctggctttcgcccatctcgactcctctctgttaggttgtgtggatgaagca
ggcaacctgatggtctggcagctgacctgcacagcaagcaaaatacttgaccaggtggtg
gttcatattcagaggccagaggacactccgctgagttcctaccatcgtctcatctggtgc
ccgttcattcaggatgataatgaggagaaccaggacgacaccagccagaccctagccctc
ctacatgaagacagagctgaggtgtgggatcttgaagtgttgagagccaataacagcagt
tggcccatcgatgccacagacttaaaggaaggcctcatcacagttaaaggacacacccag
cgagtcagtgaaggcgccctgtctccagatggaaccgtgttagctacagccagccatgat
gggtacatcaagttctggcaaatctacattgaagggactcaggacaagcccagatgtctt
catgagctgcggccccacggaggacgccccctctcctgccttcttttctgtgacaaccac
aagagacaggacccagaggttcctttctggaggttcctgataaccggagcagatcagaac
caggagttaaaagtgtggtgcactgtgtcctggacgtgtttacagaccatcagattttcc
ccggatgtttttaactcgtcagttctgccgagcctcaaggccagtctggacctgtctgca
gagtatctcatcctcactgacgtgcagagaaaggttctgtatgtgatggagctgcgtcag
gacctggagaaaggaaaagccactttcacagccgtgtccgagttcctgctgacccacccg
gtgctcagctttggggtccgggacgtggctcacagcagactgagacacactgaggttctc
cctgcagaggaggagagtgagagcctgacaacagagggcacccaaggatctacagagtct
aagtctgggatccaaattaagctcttctgtgttcacaccaagagcctgcaggatgtccag
atctggtttcagcccaacttgggttacaactcgaccggcttcctgcctcactctgattct
caggatggtttcgcagggttttcagatcacctcacagaccagagctcagacaaggagtcg
gggagtggctcacaaacagacctgaggagtatctccatgctccctgctcctgctgacttt
ctgtcaaactccaacaccagcagcgtggccatgcccaagctgatgacccctgatgccttc
atgacgcccagcacttcagtaccagcgtctcctggtagcagtgccagcagtctgactata
gtgacagccatcagcagcaactcagattcaaccaacagagctctcgacgatgtaagtcag
agtccgatcagagccgagaacaacagcagctccagtctggctctgtccacctccaccaac
agccaaagagttacctcctctgtgctgctgcctggactggagaatctgcaggctttggtg
cccccaagtggtcctcatgcactcgatggctctccagctctcgactcccctctcctgccc
cccctggcctctccgacaagagctcgctcccctgatgtgatctcatcagcctccacagcc
atgtctcaggatatgcctgaaattgcatcccagacgctgcagcatcagcgtggactcgtg
tcgagcttggacacttcacctctttctgctctgcagacagacagcatggcctctgctgcc
tccgccctgcacctgctgacctcaccacgcacagctaacaacagcttgttgccacttgag
ctgggtggtgtagatgggccagggagtgggtcagtagagccagaaccaagactcagcaac
actccgtccctcctcgagaacgctctgccccaggagaaccccggggctgggatcgggtca
gcagataacggtgttagccacacaccttggcctgctgctcctgacatcaccagagaaacc
agaaacagcctgagggacaacggtctgggagactgttcaagagatcaggaatcaaaggac
agacacctgagctcaccttatcacagacgctcctatcacctcacacacaacgacagtctg
gatgctggagcagagcagagcgaccctgatgacgaagtagccagcctggcgtcctcttca
gggaactgtggcaaccgatcctctcacagagttccggttaaggactggaagtcatcacct
cgagcctcaccaaaactaaagaggaagactaagaaagacaacagcgaatcatctcagtct
cgacaaatggactctgctcagatgaatgccgaggtacaggatgagttactgatgctcttg
cgtagccagcagagggaaataactgagctgcgtggacacgttgaagctatgcagagctca
attttggcccaggtcgggcacgtcctgacagcccaccacgaacaagagcagcgcagacta
gagcgagttatcgcagagactcagagtaaccagcagcagcttcaggaacaactgagccag
cagatcagccacgccctcagctcagccctgaccaacaggatggataaagtgctacgggag
gagatgaagaagacagtgccacagaccatcactaagagtctggagccggtgaccggtcag
ctgaataatacgatcaccgctaagctcactgctgtggaagtcactctaaaggaaaatgtc
aacaaagtcgtgaaatccaaaaacacaacggatgcgattggccgcgctgcagctgaagcg
atgcaggggcccatccaagccgcctacaaagacgccttccagagcatcgtgctgccggtc
tttgaaagaggctgccagtccatgttccagcagatcaacgacagcttcaaacagggcaca
caggaatatatccagcagctggagagccacatgaagagcagaaagcagagagagctggac
acacgagaccccatcgtggcccagctgcagcagatgatcgacggcttccaaagctccaca
gataagctgagcagcaccatcacggctaacgtccgagcagaggttcagcaccaaatccag
atgatggtgggaaatttacaggagtccatcctgagccacgtgcagcggatcgtcaaagga
gaggtgagcttggccatgaaggagcagcaggcagtggtcacctccagcatcatgcaggcc
atgaggtcagcagcaggcacgcccgtccccacagcacacctggactaccagacgcagcag
gcaaacatcctgcagctcctccagcagggtcagctcaaccaggctttccagcaggctctg
tcagcgacggatctgaacctggtcctttatgtatgtgagaccatcgactcccagcaggtg
tttgggcagcacccctgtcctctgagccagcctgtgctgctgtcactcatccagcagctc
tcctccaacctcaccacccgctctgaactcaaaatcagctacatggaggatgcagtgatg
aatctggaccacggagaccccatgacccgagaccacatggccatcgtgctggcccaggtc
cgaccgaagctcttctccttcatgcagcaggatccccacagcccactcagcaagagggcc
aggcgcctgatgatgatgctgcagggtctggtgaaccactaa
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integrated database retrieval system
