Halichoeres trimaculatus (threespot wrasse): 141796642
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Entry
141796642 CDS
T11192
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
htc03036
]
141796642 (tdrd12)
Enzymes [BR:
htc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
141796642 (tdrd12)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
141796642 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
141796642
NCBI-ProteinID:
XP_074533971
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MLKISILKIDNPSCLWGRVVHGPGGDAETALQHDCLLAQMNLFYHDVTQDMRKLKPPSLE
EGQVYVVYWSVIKSWCRAVVESIISDCQARCFLVDHGERLLVPTDQIRVAAQKFLQLPFW
VRRFHLAGIRPMTLRVTVIEKAELIPSSHWDSSATLYLHNLLQASTRTEAVLIESESDST
SIELYLTVGNIKICVNDDLVVKRFAVYIRESADNTRLDEVDQFPVMLSPGVLTQLSPPRT
VCSASPERSEQTQTPPVMLQGEDAIGAGDWLTAPSADQRQQELRTCEKAKELQLSPSSQS
KNSLEAVAESDSSEETDSSLAAALTKNLSLFRFLKFLNPSSSYQQAAPKVSQQEEQTACE
PGETSAVSVACAGDEGCTPGDSYKQSKLSHSSEAVTHQEQTSLSVSDVVIHRQSGAAGVG
ESLHVEYPADEDTSVSTSAESGAANKSWRSEEDQACSRLLEWLNPEPLNSDPDAGEDVAA
PSDPSDPRRSGILVHSAFPVEPCTCLEDAPVTATLRRVLQRKQYISLSPADCYSWPAVAR
GCNTLVISPNADQPLSYLAPLLTHILLNSIFTSLTSSTGPIVVLLCPGWEKVQAVYDLLD
QIKVGQILHPVVVQLGHGKDEAKAVKIPKNCLLLVTTPFSLVRLLTCHCFLFLRMYHLVL
DQADQLFSLAPDEMETILQHFQKVNSSEQKASCPQQLITVAKRWTSHMEGLLTNHMPHPC
VVITAPEEAALYGSVQQIILMTLESSKISVLLSALDFSPVVRQKTLIITNSAREVDDVFK
AVTNKSAFCLKTHEGLSHQFDFVAQQWRKDIGRGTQVILVTTTECLKYLGIQDATCVVHY
SFPTSPKVFGSRMFCMAENFRDLSGRVSSLGQSESSLPLTRSVLLISEMNTRHVVGVLRY
LVRTNALLPSELFSFAQGVHVAREDQKTNRPLCKYVKSFGACRDSSVCPDRHRIIPQLDC
SVLPASGVIEVVPLHIKTASVFYGSIIRREEGGFQSLVSEMTSYYSDKKPGATELLVGDL
YAVQEEEVFHRVKILSVPDRGDRLFFSVLVRFIDVGHEAEMKSHQILQLPEQFHSLPGQA
VEIIVCGVKPVDGETDWHPKVTRAISQKIRGLQHRAQAVFSLGNTVFVDPMVRVTQVQGM
KAVINEYSVKSEILNTGMGVTNPEHLDQLRALFQENEAESCKEAGHMSGSEDGPVSLEAR
IKAEEEVLAEVSRLSDLPPLQPCEPLSPLTVIQSIIPETQAPNLALCDQIPLRDQQEERN
SHTPDLRIEAGGDLNLTTSQAALINAGGPAGDESSSRHVDTTEERNCDVPTKSLHPQVRW
FQTPDSVVLTVKLTNPESQRCEFHPDRVVYSGRVSGQTYRADLELHANIEADLCSWRVKC
NEPVLTLVKQQQGYWEKLLKSKNIFVSYDLEHFEENKDRISNGVCFFGDTGEDGWYHNPE
SDSDSD
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatatctattttgaagattgacaacccgtcctgcctctggggtcgggttgta
catggtccaggtggcgacgcggagactgcacttcaacatgactgtctgctggctcagatg
aaccttttctaccacgatgtcactcaggatatgcgcaagctgaagcccccttcattagag
gagggacaggtgtatgtggtgtactggtcggtcataaagtcatggtgtcgtgcagtggtg
gagtcaatcatcagcgattgccaggctcgctgcttcctggtcgaccacggagaacgactt
cttgtccccacagatcagatccgagtcgctgcgcagaaattcctccaacttcctttctgg
gtgcggaggttccacctggcggggatcagacctatgaccttgcgggtgactgttattgag
aaggctgagctcatcccatcttctcactgggacagctctgcgacactctacctacacaac
ctgctgcaagcatcgactcgcacagaggccgtcctgattgaatctgagtctgactccacc
tccatcgagctctacctcactgtgggaaacatcaagatctgcgtaaacgatgacctggtg
gtgaagcggtttgcggtttacatcagagagtcagctgataacacccgcctggatgaggtg
gatcagttccccgtcatgttgtctcctggtgttttaacccagctcagccctccgaggact
gtgtgcagcgcttcacctgagcggagcgaacaaacacaaacacctccagtgatgttgcaa
ggcgaagatgcaatcggagcaggtgattggctgacggctccgtctgcagatcagaggcaa
caggagctgaggacctgtgagaaggccaaagagctacaactgtccccaagcagccaatca
aagaacagcttagaggctgttgctgaaagtgattcatcagaggagactgactcgtctctg
gctgcagctctgaccaaaaacctcagcctgttcaggttcctgaagtttctgaatcctagc
agcagctaccagcaggcagctcccaaagtgagtcagcaggaggagcaaacagcctgtgaa
cctggagagacgtctgcggtctccgtcgcctgcgcaggagatgaagggtgcactcctgga
gattcatacaaacaatcgaagctgtcgcacagcagtgaggcagtgacacatcaggagcag
acatcactcagtgtgagtgatgtggtgattcacagacaaagtggagctgcaggtgttggt
gagagccttcacgttgaatatcctgcagatgaggacacaagtgtgagcacatcagctgag
tctggagcagccaacaaatcatggaggagtgaggaggaccaggcctgttcacgccttctg
gagtggttgaaccctgagcctttaaactctgatccagacgcaggagaggatgtggctgct
cccagtgatcccagtgatcccaggaggagtgggattctggtgcactccgccttcccagtg
gagccctgcacctgcctggaggacgcccctgtcaccgccactctccgacgggtgttgcag
aggaagcagtacatcagtctgtctccagctgactgttacagctggccagccgtggctcga
ggatgcaacacgctcgtcatctcccccaacgctgaccagccactcagctacctcgctcca
ctcctcacccacatcctcctcaactccatcttcacctccctcacctccagcacagggccc
attgtggtgctgctgtgtcctggttgggagaaggtccaggctgtatacgacctgctggac
cagataaaggtcggccaaatcctccaccctgttgttgtgcagctgggccacggcaaagac
gaggccaaggctgtgaagatccccaaaaactgcttgctgttggtgaccactcccttcagt
ctggtccgtctgctgacctgccactgcttcctgttcctgcgtatgtatcacctggtgctg
gaccaggccgaccagctcttctccctcgctccagacgagatggaaaccatcctgcagcat
ttccagaaggtaaactccagcgagcagaaggcgtcctgtccccagcagctcatcaccgtt
gccaaaagatggaccagtcacatggagggcttgttaaccaatcacatgcctcacccctgc
gttgtcataacggcccctgaggaggctgctctctatggcagcgttcagcagatcatcctc
atgactctggagagcagtaagatctcagtcctccttagcgcgttggatttcagcccggtc
gtcagacagaagactctgattataacaaactctgctcgggaagttgacgatgtctttaag
gctgtaaccaacaagtctgcgttttgcctcaagacccacgaggggttgagtcaccagttt
gactttgtcgcccagcagtggaggaaagacatcggacgcggcactcaagttattctggtg
accaccactgagtgcctgaagtacctgggaatccaagatgcaacttgcgtggtccactac
agcttccccacttcccccaaagtgtttggcagccggatgttctgcatggcggagaacttc
agggacctttcaggacgagtttcctctctcggccaatcagagagcagcctgcctctcacc
agatcagtgctgttgatctctgagatgaacacccgtcacgtcgtcggggttctgcgttac
ctggtacgaaccaacgccctgctgccctctgagcttttctccttcgctcagggggttcat
gtggcccgggaggaccagaagaccaacaggcctctctgcaaatacgtcaagagctttggg
gcgtgcagagacagcagcgtgtgtcctgatcgtcacaggattattccccagctggattgc
tctgtgctcccagcctcaggggtgatagaggttgtgcctctccacatcaagacagcgtca
gttttctacggctctatcatccggagagaggagggaggtttccagagcctggtgtctgag
atgacttcctactactctgacaagaaacccggagccacagagctgctggtgggagactta
tacgctgtccaggaggaggaggttttccacagggtgaagatcctgtccgtccctgatcga
ggtgaccgcctgttttttagcgtccttgttcggtttatagacgtgggacacgaggcggag
atgaagtcccatcagatcctacagctgcccgagcagtttcactccctgcctggtcaggcc
gtggagatcatcgtctgtggggtcaaacctgtcgatggagagactgactggcacccgaag
gtcaccagagccatcagccagaagataagaggcctgcagcaccgggctcaagctgtgttc
agtctgggaaacaccgtttttgttgatcccatggtgcgcgtgactcaggttcaaggcatg
aaagctgtgatcaacgaatacagcgtgaagtcagagatcttaaacacggggatgggagtc
accaacccagagcatctagaccagctgagggcgctcttccaggagaacgaagcagagagc
tgcaaggaggcgggacacatgtctgggtcagaggatggtcccgtgtctctggaagccaga
atcaaagcggaggaggaggttttggctgaggttagtcgtctctctgaccttcctccgctc
cagccgtgcgagccactcagtccactgacagtgatccagtccatcatcccagagacgcaa
gcaccaaacctggccttgtgtgaccagatccccctgagagaccaacaggaagagagaaac
tcccacactcctgatctgaggattgaagctggaggagatctgaacctcacaaccagccag
gctgctctgattaacgcaggtgggcctgctggtgatgaaagcagcagccgtcacgttgac
accactgaagagagaaactgtgatgtcccgacaaaaagcctccaccctcaggtccgctgg
ttccagacgccggactctgtggttttaacggtgaagctaacgaaccccgagagccagcgc
tgtgaattccatcccgacagagtcgtctacagcggcagagtgagcggtcagacttacaga
gcagacctggagcttcacgctaacatcgaagctgacctctgcagctggcgagtgaagtgc
aacgagccggtcctcacgctggtcaaacagcagcagggatactgggaaaaactcctcaag
agcaagaacattttcgtgagttacgatctggagcactttgaagaaaacaaagacagaatc
tcaaacggcgtttgcttttttggggacacaggagaggacggctggtaccacaacccagag
agcgacagtgacagcgactga
DBGET
integrated database retrieval system
