Halichoeres trimaculatus (threespot wrasse): 141796726
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Entry
141796726 CDS
T11192
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, a
KO
K07523
netrin-G1 ligand
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
141796726 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
htc04515
]
141796726 (lrrc4ca)
Cell adhesion molecules [BR:
htc04515
]
Immunoglobulin superfamily
NGL family
141796726 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
ig
Ig_3
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
141796726
NCBI-ProteinID:
XP_074534080
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MLNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLSVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPSHHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELRCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGYTTTVQQKVGP
TPSAGTWESVSPTSTTTTTVRTPLTTRATEKTYTIPVTEPVGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHATINSIHSSVHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaat
cgggccttgtccgaccctttgtttgtgctgctcctggccctccagctgctcgtggtggca
gggctggtacgtgctcagacgtgcccctccgtctgctcctgcagtaaccaattcagcaaa
gtcatctgcaccagacgaggcctgcgggaagtccctgatggcatctcgaccaacacacgc
tacctgaatctacaagaaaatctcatccaggtcataaaggtggacagcttcaagcacctt
agacatttggagattctgcagctgagcaaaaaccacatacgcaaaattgagctgggagcc
ttcaatggactggccagcctcaataccctggagctttttgataatcgcctcactactatc
ccaaatggggcatttgagtacctgtccaaactaaaggagctttggctgagaaataacccc
atagagagcattccctcctatgctttcaatagagtgccctcgttgaggcggttggacctt
ggggagctcaaacggctctcttacatctctgagggagcatttgaagggttgagcaatctg
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaaccttattcccctggtg
aagctggatgaactggagatgtcagggaaccagctatctgtcatccggcctggctctttt
aaagggcttatccatttgcagaagctgtggatgatgcatgcccagatccagaccatcgaa
agaaactcttttgatgatctgcagtctttagtggagcttaatctagcccataataacctt
acccttttgccccatgatcttttcacacctttacatcacctggagagagtgcacttgcac
cacaacccgtggaattgtaactgtgacatcctttggctaagctggtggcttaaggagatg
gttccagcaaacaccagctgctgtgcacgctgcagctcaccgtcccaccataaggggcga
tacattggcgagttggaccagaactactttcactgttatgctcctgttattgtggagcct
cctgcagatctaaatgtgacagaggggagtgccgcagagttaagatgcagagccagctcc
ttgacatctgtaagctggattacacccaatggctccatcatgacacacggtgcatacaag
atcagaatctctgttctcaacgatggcactctgaacttcaccaatgttaccatgcaggac
acaggcacgtatacatgtatggttagtaactctgcaggtaacacaacagcatctgcaacg
ctcaatgtgtcatccacagagaacagcagtttcagctacttcaccacagtcacagtggag
accatagagacgccgcataatgaaggctacacaactacagtgcagcagaaggtgggcccc
actccctctgctggaacatgggagtctgtgtcacccacttctacaaccaccacgacagtc
cggacgccactcaccacacgcgccacagagaagacgtacacaatccctgtcacggagcca
gtaggagagggctcactgaacggcctggatgaggtaatgaagaccaccaagatcatcatt
ggctgctttgttgcaatcacactcatggcagcggtcatgctgatcatcttctacaagatg
cgtaagcagcaccaccagcagaaccaccatgcacccacacgcactattgagatcatcaat
gtggatgaggactgtgtaacaggaggcccgggcatggagggccacctgactctgcctcct
cttgagcacgagcacctcaaccactataacacttataagactgcatacaaccatgccact
atcaactccatacacagctcagtgcacgaacctttgttaattcgggccagctcaaaagac
aacgtacaagagacccaaatctaa
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