Halichoeres trimaculatus (threespot wrasse): 141796787
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Entry
141796787 CDS
T11192
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141796787 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htc03021
]
141796787 (sf3b3)
03041 Spliceosome [BR:
htc03041
]
141796787 (sf3b3)
03036 Chromosome and associated proteins [BR:
htc03036
]
141796787 (sf3b3)
Transcription machinery [BR:
htc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
141796787 (sf3b3)
Spliceosome [BR:
htc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141796787 (sf3b3)
Complex B
141796787 (sf3b3)
Complex C
U2 SnRNP specific factors
141796787 (sf3b3)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
141796787 (sf3b3)
TFTC complex
141796787 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
141796787
NCBI-ProteinID:
XP_074534155
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGTTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLIGGGEKLEFVHKTPVEDVPLAIAPFQGRIL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIYTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVVVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacatcaccctgcagcgagccacaggcatcactcatgccatccatgga
aacttctcaggaaccaagatgcaggagattgttgtttccagagggaagatcttggaattg
ttgcgaccagatgcaaacacaggaaaggtgcacacacttcttacagtggaggtgtttggc
attgttcggtccttgatggccttccgacttactgggggtaccaaagattacattgttgtc
gggagtgacagtggccgtattgtcatcctggagtatcatccatccaaaaacatgtttgag
aagatccatcaggaaacttttgggaagagcggctgcagacgcattgtcccaggccagttc
ctggctgttgacccaaaaggcagagctgttatgattggagcaatagagaaacagaagctg
gtctatattttgaacagagatgcggctgccaggcttaccatctcctctccattggaggca
cacaaagcaaacacactggtctaccatgtagttggagtcgatgttggctttgagaatccc
atgtttgcctgccttgaaatggactatgaggaagcggataatgatccaacaggagaagca
gcagccaacacgcaacagacgctcactttctatgagctggatctgggtttgaatcatgtg
gtccgcaagtacagtgaagctttggaagagcatggaaacttcctcattacagtccctggt
ggatccgatggacccagtggagttctgatctgctctgaaaactacatcacctacaagaat
tttggagaccagccagacatcagatgtcccatcccacgacgcaggaatgacttggatgac
cctgagcgcggcatgatatttgtctgctcggcaacacacaagacaaaatccatgttcttc
ttcctggcccagacggagcagggggatatttttaaggttaccctggaaacagatgaggaa
atggtcacagaaatccgactgaaatacttcgacaccatccccgtcgcaacagccatgtgt
gtcctgaaaacaggcttcctgtttgtttcttcagagtttggaaaccattacctttatcag
attgctcacttgggcgatgatgatgaagagccagagttctcctccgctatgcctcttgaa
gaaggagacacctttttctttcagcctcgccccctcaaaaaccttgtgctggtggatgaa
caggagaacttgtcacccatcatgtcatgccagattgctgatttggcaaatgaagacaca
ccccagctgtatgttgcatgtgggcgaggacccaggtctactctgagggtcctaagacat
ggactggaggtgtcagagatggctgtgtctgagctgcccggtaaccccaacgctgtgtgg
acagtgcgcagacatgtggaagatgagtttgacgcctacatcatcgtgtctttcgtgaac
gccaccctggtcctgtccatcggggagactgtagaggaagtgacagattctggatttctg
ggaacaacgcctactctctcctgctcgctgctgggtgaagatgctttggtgcaggtgtac
cctgatggtattcgtcacatccgcgctgacaagcgtgtgaacgagtggaagactccaggc
aaaaaaactatcgtccgctgcgccgtgaaccagagacaggttgtcatcgcactcactgga
ggggagctggtctactttgaaatggacccgtccggccagctgaatgagtacacagagcgg
aaggagatgtctgcagacgtggtttgcatgagtctggctaacgttccacctggtgagcag
cgctcacggttccttgctgttggacttgttgacaacactgtcaggatcatctccttggac
ccttcggactgcctccagcctctgagtatgcaggcccttccagcccaaccagagagcctg
tgtatcgtagagatgggtggagtagagaaacaggatgaacttggtgaaaagggaacgatc
ggttttctctacctcaacatcggacttcagaatggtgtgctgctgaggactgtgctggac
cctgtgacaggcgatctgtccgataccagaacacgctacctgggttcacgacctgtcaaa
ctcttcagagtcaggatgcagggacaggaagctgtgctggctatgtccagtcgctcctgg
ctcagttactcgtaccagtctcgcttccacctgacccctctgtcctatgaaactctggag
tacgcctctggttttgcttctgagcaatgtcctgaaggcatcgtggccatttccaccaac
actctgagaatcttggctctggagaagctgggagctgtcttcaaccaggtggcgtttcct
ctgcaatacacacccaggaaatttgtcatccacccggagaccaacaaccttattttgatc
gagactgaccacaacgcctacactgaggcgaccaaagctcaaagaaagcagcagatggct
gaggagatggttgaggctgctggcgaggatgagagagagttggctgcggagatggctgct
gccttcctcaacgaaaatcttcctgaagccatttttggtgctcccaaagccggagcagga
cagtgggcctcactggtgcgtctagtcaaccccatacagggaacaactctcgaccaggtg
cagctggaacagaacgaggctgcgttcagtgttgcagtgtgccgtttcccaaacactgga
gacgattggtatgttttggttggagttgccagggacatgattctcaaccctagatcagtg
ggcggtggatttatctacacgtatcgtctcattggtggaggggagaagctggagtttgtg
cacaagactcctgtcgaggacgtgcctttagccattgcaccattccaaggaagaatcctg
gtgggagttgggaagctgctgcgaatctatgacctcggcaagaagaagctgctccgcaaa
tgtgaaaacaagcacgttcccaacctggtgacgggcatctacaccatcgggcagcgtgtc
attgtgtctgatgttcaggagagtctgttctgggtccggtaccgacgcaacgagaaccag
ctcatcatctttgctgatgacacatacccacgctgggtgaccacagcctgcctgcttgac
tacgacaccatggcctctgctgacaagtttggaaacatcagtatagtgcgtctcccccca
aacaccagtgatgatgtggatgaagaccccacaggaaacaaagctttatgggacagaggc
ctccttaatggcgcatcacagaaggctgaagtggtggtgaactaccacgtaggagaaacc
gtgttatcactccagaaaacaaccctgatccctggaggctcagagtccctggtttacacc
acgctctctgggggcatcggcattctggtgccgtttacgtcacacgaggaccacgacttc
ttccagcatttagagatgcacatgcgctccgagttcccgccactgtgtggcagagatcac
ctcagcttccggtcgtactacttcccagtcaagaatgtgatcgatggagatctgtgcgag
cagtttaacagcatggaccctcacaaacagaagagtgtggcagaagagctggacaggacg
ccccctgaggtctccaagaaactagaggacatccgcactcgttacgccttctaa
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integrated database retrieval system
