Halichoeres trimaculatus (threespot wrasse): 141796851
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Entry
141796851 CDS
T11192
Name
(RefSeq) transcription factor SOX-6-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htc03000
]
141796851
Transcription factors [BR:
htc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141796851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Activator_LAG-3
MPS2
Motif
Other DBs
NCBI-GeneID:
141796851
NCBI-ProteinID:
XP_074534236
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MMSSMRATPPFHPPSEEEEALGQDMAVWAGDKREGPKESLSPSLHDQPDELQPIREKLTE
AEWETATPAATDNENSKGCSVYSYRTNSTSPTKPEECSREQQMIGLSFGTPERRKGSLAD
VVDTLKQKKLVELTKTEQDEPTCMERLLSKEWKERVDRLNANELLGEVKGTPESLEEKER
QLSTMIGQLISLREQLLSAHDEQKKMAASQLEKQRQQMELARQQQEQIARQQQQLLQQQH
KINILQQQIQVQGHMPPLMIPVFPHDQRSLAAAAAAQQGFLFPPGMSYKPGENYPMQFIP
STMAAAAASGLSPLQLQQLYAAQLASMQISPGAKMTPLPQAPNSSGPLSPSALKSEKRAS
SPVSQIKEEGSTQPLNLSARPKTADPLRSPTSPTHSLFSGNKTSPSGLGKGRIPSPLSGM
GRNSSLDILSSLNSTALFGDQDAVMKAIQEARSMREQIQREQLHQQQQQQQPGHHSLEAK
LSALSSMSLNNGNKERLHYETLSQHLGKLGEDAGKMVHRVIDLTRPEDLDGNNVMEARVF
REARGRNTSEPHIKRPMNAFMVWAKDERRKILQTFPDMHNSNISKILGSRWKAMTNQEKQ
PYYEEQARLSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFVGP
QPPIPLGSSPGGVYPGAISMATTATPSPHLTSDCSSNSASPEPAIPVIQSTYGVKSEPGG
GSNGGGMGALDLPSDPANGDDDMDMYEDFEDEPKSDYSSDHETREAVSAN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttccatgagagctacgcctcccttccacccgccgtctgaggaagaggaggcg
ctggggcaggacatggcggtctgggccggcgacaagcgagaaggccccaaggagagcctg
tccccgtctctgcacgaccaaccggacgagctgcagccaatcagagagaagctgacggag
gccgagtgggagaccgccacgcctgctgccacggacaacgagaacagcaaaggctgctcc
gtctactcctaccggactaactctacctcccccaccaagcccgaggagtgctccagggag
cagcagatgatcggcctcagcttcgggacgccggagcgccgcaaaggaagcctggcggac
gtggtggacacgctgaagcagaagaagctggtggagctgaccaagacggagcaggacgag
cccacctgtatggagcggctcctctccaaggagtggaaggagcgcgtggaccgtctgaac
gccaacgagctgctgggagaggtcaaaggtacgccggagtctttggaggagaaggagcgc
caactgtccaccatgatcggtcagctgatcagtctgcgggagcagctcctctcggcccac
gacgagcagaaaaagatggccgcctcacagctggagaagcagagacagcagatggagctg
gcccgccagcagcaggagcagattgccagacagcagcagcagctcctgcagcagcagcac
aagatcaacattctccaacaacagatccaggttcagggtcacatgcctcctctgatgatc
cccgttttcccccacgaccagcgctctctggctgccgccgctgccgcacagcaaggcttc
ctcttcccgccaggcatgtcctacaagccaggtgagaactaccccatgcagttcattcca
tccaccatggccgccgcagcagcgtctggactcagcccgctacaactacagcagctgtac
gccgcccagctggcgagcatgcagatctccccaggagccaagatgacccccctcccacag
gctcccaactcctccggccccctttccccgtccgccctgaagagcgagaagcgagcgtcc
agtccggtctcgcagatcaaggaggaggggtccacacagccgctcaacctctcagccaga
cccaagacagccgacccacttcgctccccgacgtcccccacacacagtctgttctccggg
aacaagaccagtccttcaggcctgggcaaaggccgcatccccagcccgctgtccggcatg
ggcaggaactcttctctggacatcttgtccagcctgaactccacggcgctgttcggggac
caggacgcggtgatgaaggccatccaggaggcgaggagcatgagggagcagatccagagg
gagcagctccaccagcagcagcagcagcagcagccgggacaccacagcctggaggccaag
ctgtccgcgctgagcagcatgagcctgaacaacggcaacaaggagcggctgcactatgag
acgctgagccagcacctggggaagctcggggaggacgctgggaagatggtccatcgagtc
atcgacctgaccaggcctgaggatctggacgggaacaacgtcatggaggcgcgggtgttc
agggaggcgcggggcaggaacaccagcgagccgcacatcaagcggcccatgaacgccttc
atggtgtgggccaaagacgagaggaggaagatcctgcagaccttccccgacatgcacaac
tccaacatcagcaagatcctgggctctcgctggaaagccatgaccaaccaggagaagcag
ccatactacgaggagcaggcgcgcctcagcaagatccacctggagaaataccccaactac
aagtacaagccgcggcccaagaggacctgcatcatcgacggcaagaagctgaggatcggc
gagtacaagcagatgatgaggtcacggcgccaggagatgaggcagttctttgtggggcct
cagccccccatccctctcggcagcagcccaggcggagtttaccccggcgccatctccatg
gccacgacagccacgccgtccccacacctgacctcagactgctccagcaactcagccagc
cccgagcccgccatccccgtcatccagagcacgtacggggtgaagtccgagcccggcggg
ggcagcaacggcggcgggatgggagcgctggatctgcccagcgaccccgccaacggcgac
gacgacatggacatgtacgaggactttgaggacgagcccaagtcagactatagcagcgac
cacgagacacgggaggccgtcagcgccaactga
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