Halichoeres trimaculatus (threespot wrasse): 141797168
Help
Entry
141797168 CDS
T11192
Symbol
pdzrn3b
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
htc04121
]
141797168 (pdzrn3b)
Enzymes [BR:
htc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141797168 (pdzrn3b)
Ubiquitin system [BR:
htc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
141797168 (pdzrn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
Prok-RING_4
Sina_ZnF
zf-rbx1
PDZ_Tricorn
zf-TRAF
CdiI_2
U-box
zf-RING_6
TRAF3_RING
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
141797168
NCBI-ProteinID:
XP_074534723
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MGFELDRFKGTVDPDFKCNLCNKVLEDPLTTPCGHVFCSGCILPWVVQQGSCPVKCQRIS
AKELNHVLPLKSLILKLEIKCDNYARGCNAVVKLQLLAEHSEMCDFSPVKCRNSGCIEVL
NLGAVDLHMRETCDYRPVGICERGCGLVLTHKDQKLNSHCCQTALKEHNSALEYKLICLD
REMKKQTIEANEREKSLLAQLSAVHSELQMTALKYQKKFTEYSERIESLTKTLAFPYKEE
HTRSLTVHLLREGGSLGFNIIGGKLSTDAAESTSNEGIFVSKIVAEGPADKEGGLQIHDR
IMEVNGMDLSKSTHDQAVEAFCNAEEPIMVKVLRQALNHTLVSQAPDSQLSEVSTQTDIT
LQHILMLPKLPFPSSPTKLDEYLLSEEHLPGHVYFDPNNFLEGIQQDIEREVLEYEEVDL
YRANVQDKLGLTICYRTDDEDEAGIYISEIDPNSIAAKDGRIREGDKIIQINGVEIQNRE
DAVALLISEGRQNISLLVARPEMQLDEGWMDDERNDFLDELHMDMLEQQHNHAMQFTANI
KQQKKQEEDEGTTDTATILSNHHEKDSGLGRTDESTRNDESSEQENLGDDQTTASSTLDS
SKKLTYSHDTLGSTDLPFGSGSFISADYAETDPLGITADECEHFRELLELKCCRRKNPPC
QAGGAVGQDQEGVDKELEQLNEELRTIELECLNIAHFHKLQLLREQCHGSWMLHNSGFRN
YNTSIDAHQHKLSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLCREAGNRAS
ARVSCYNNSNVRMLKPLLYPVQEACGPTQKGDSFKDPAGALQAESRERKLAEVSQSKKNL
SQSHSPYRHAHIPAHAQHYQSYMQLIQQKSAVEYGQSQMSLVSMSQDYIIPGDIVPKMEW
KVKVRSDGTRYITKRPVRDKLLRERALRIHAERSGMTSDDDAISELKMGRYWSKEERKQH
AVRAKEQRQRREFMKQSRAECQKETASVEDKKGPNIIELSHKKLMKKRNKKIFDNWMTIQ
ELLTHGTKSPDGTRAYNSLLSVTTV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagttggaccgcttcaaggggactgtggacccggattttaagtgtaacttg
tgcaacaaagtcctggaagaccctctgacgactccgtgcggtcacgtcttttgctctggc
tgcattctgccctgggtagttcaacaaggcagctgtcccgtcaaatgtcagcgaatctcc
gccaaagagctgaaccacgtcctgcctctgaaaagcctaattctaaagctggagatcaaa
tgtgacaactatgcgcggggctgtaatgcggtggtaaagctccagcttctggccgagcat
tccgagatgtgcgacttctccccggtgaagtgcagaaattcaggatgcatcgaggtcctc
aacctgggggctgtggatctccatatgcgggagacgtgcgactacaggccggtaggaata
tgcgagaggggttgcgggttggttctgacccataaggatcagaaactgaacagtcactgc
tgtcaaacagccttgaaggagcacaacagcgcactggagtacaaactcatttgtctggac
agggagatgaagaaacagaccattgaagccaacgaaagagaaaaatcactcctggcacaa
ctttcagcggtgcacagcgagcttcagatgacagctctgaagtaccagaagaagtttact
gagtacagtgaaaggatagaatctctcaccaagacactggctttcccttacaaggaagaa
cacactagaagcctgactgtccatcttcttcgtgagggaggatctctaggttttaacatc
ataggaggaaagctaagcacggatgcagctgaaagcacttcaaatgaggggatctttgtt
tccaagattgttgcagaaggtccggcagacaaggaagggggccttcaaatacatgacagg
atcatggaggtcaatggcatggatctttccaagtccacccatgatcaagcagtggaggcc
ttctgcaacgctgaggaacccatcatggtcaaagttctgcgccaagcccttaatcataca
ctggtcagccaggctcctgactcccagctttcagaagtcagcacgcagaccgacatcacc
cttcagcacatcctgatgctcccaaaattaccttttccttcatctccaaccaagctggat
gagtatctgctttcagaagagcatcttccaggacacgtttacttcgaccccaataacttc
ctggagggtatacagcaggacatagagcgtgaggtactggaatatgaggaagttgatttg
tatagagccaatgtccaagacaagcttggtctgacaatctgttacaggactgatgatgaa
gatgaggctgggatctacataagtgagattgatccaaacagcatcgctgcaaaggacggt
cgaataagagagggagacaaaatcattcagattaatggtgttgaaatccagaaccgggag
gatgctgtggctttactgatcagtgaaggaagacagaatatctctttgctggtggctaga
ccagagatgcagcttgatgagggctggatggacgacgaaagaaatgactttttggatgaa
cttcatatggatatgctcgagcagcagcacaaccatgccatgcagttcactgcaaacatt
aagcagcagaagaagcaggaagaagatgagggcaccacagacacagcaactatactgtcg
aaccatcatgagaaggacagtggtcttggtcgaacagatgagagtacgcgaaatgatgag
agctcagagcaggagaatcttggtgatgaccaaaccacagcatccagcaccctggacagt
agcaaaaagctgacctacagtcatgacacccttggcagtactgacctgcccttcggcagt
gggtcatttatctctgcagactacgctgagacagaccctctgggtatcacagctgatgag
tgcgagcatttcagagaacttttggaactgaagtgctgcaggagaaaaaatcctccctgc
caggctggtggagcagtgggtcaggatcaggaaggtgtggacaaagagctagaacagctt
aatgaggagctacgcaccattgaattggagtgcctaaatattgcccattttcacaagtta
cagctgctcagagagcagtgccacgggtcctggatgctccacaacagtggcttccgcaac
tacaacaccagcatcgatgcacatcaacacaagctctcagacattacagagctgccagaa
aaatcagacaaagacagctcaagtgcctacaacaccggtgagagctgccgcagcacaccc
ctcaccctggagttatctccagacaactcactttgtcgagaggcagggaatcgggcttca
gctagggtgtcgtgctacaacaactccaatgtcaggatgctcaaaccacttctgtaccct
gtgcaggaagcctgtggccccacccagaaaggagactccttcaaagacccagctggagca
ctgcaagcagaaagtagggaaagaaaacttgcagaggtcagccagtcaaaaaaaaaccta
tctcagtcacattcgccttacaggcatgcccacatccctgcccatgcccagcactaccag
agctacatgcagctgatccagcagaagtcagctgtggagtatggtcagagccagatgagt
ctggtcagcatgtcccaagactacatcatccctggtgacattgtgcctaaaatggagtgg
aaggtgaaggtccgcagcgatggcacacggtatatcaccaagcggcctgtgcgagacaag
ctgctgcgagagcgtgctctccgcattcacgcagagcgcagtggcatgacatcagatgat
gatgctattagtgagctgaaaatgggccgttactggagtaaggaagagaggaaacagcat
gcagtccgtgccaaggagcagaggcaacgtcgggagttcatgaagcagagccgagcagag
tgtcagaaagagacagccagtgtagaggacaagaaggggcccaacattatcgaactcagc
cacaaaaagttaatgaaaaagaggaataagaaaatatttgacaactggatgacaatccag
gaactgctgacccatggcactaagtcaccagatggcacaagagcctacaactcgctcctg
tctgtcaccacggtgtga
DBGET
integrated database retrieval system
