Halichoeres trimaculatus (threespot wrasse): 141797489
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Entry
141797489 CDS
T11192
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141797489 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
htc03041
]
141797489 (prpf8)
Spliceosome [BR:
htc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
141797489 (prpf8)
Complex C
U5 SnRNP specific factors
141797489 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
141797489
NCBI-ProteinID:
XP_074535001
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPPGMPPGVPSPAPVPDYMTEEKLQEKARKWQHLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPEEDSACVEWLYEHQPLKDTTKFVNGTTYRRWQFTLPMMST
LYRLANQLMTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDHTANGIALLWAPRPFNLRSGR
TRRAIDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccttcccctacagaggggtcccccctgggatgccaccaggtgttccctct
cctgcgccagtgccagactacatgactgaggaaaaacttcaagagaaagcacgaaaatgg
cagcacttgcaagccaagcgctattcagagaagagaaagtttggctttgtggatgcccag
aaggaagacatgccacctgagcatgtgcgcaagatcatcagggaccatggagatatgacc
aacagaaagtttcgccatgacaagagggtgtaccttggtgccctgaagtacatgccccat
gctgtgttgaagttgctggaaaacatgcccatgccctgggaacagatcagagatgtacct
gttctctaccacatcactggagctatttcctttgtgaatgaaatcccctgggtcatagag
ccagtctacattgctcagtggggcaccatgtggatcatgatgcgtcgtgagaagcgtgat
cgccgtcactttaagaggatgcgattcccgccattcgacgatgaggagccgccattggac
tacgctgacaacatccttgatgtggagccgctggaggccattcagatggagctggaccca
gaggaggactcagcatgtgtggagtggctttatgagcaccagcccctcaaagacacaacc
aagtttgtgaatggcaccacctaccgccgctggcagtttaccttacccatgatgtcaaca
ttgtaccggctggccaatcagctgatgacagacctggtggattttaactacttctatctg
tttgacctgaaggcctttttcacttcaaaagctttgaacatggccatcccaggagggccg
aagtttgaaccgctggtcagggacatcaacctccaggatgaagactggaatgagttcaat
gacatcaacaaaatcatcattcggcagcccatcaggacagagtataaaatagcatttcca
tacctgtacaacaacttgccacatcatgtccacctgacctggtatcacacacccaatgtg
gtgttcatcaagacagaggacccagatctgccggcgttctactttgatccactgatcaac
cccatttctcacagacattctgtcaagagtcaagagcctcttcctgatgatgatgaggag
tttgaactgcctgagtatgtggagcccttcctcaaagaaactccactctacacagaccac
actgccaatggcatcgctctgttgtgggcacccagacccttcaacctccgatctggccgc
acaagacgtgcaattgatattcccttggtcaagaactggtatcgtgagcactgccctgca
ggacagccagtgaaagtacgcgtgtcatatcagaaactgctcaagtactatgtgctcaat
gctctgaaacacagaccacccaaagcccaaaagaagaggtatctgttccgctccttcaaa
gccaccaagttctttcagtccacaaagctggactgggtggaggtgggtctgcaggtgtgc
agacagggctacaacatgctcaatctcctcatccaccgaaagaacctcaactacctgcat
ctggactacaacttcaatctgaagcctgtcaagactctgaccacaaaggagcgaaagaag
tccagattcggtaacgccttccacttatgcagagaggtgcttcgtctcagcaaactggtg
gttgacagtcacgtccagtacagactgggaaatgttgacgcctttcagttggctgacggg
ctgcagtacatctttgctcatgtgggtcagctgacaggaatgtaccgctacaagtacaaa
ctgatgaggcaaatcaggatgtgcaaagatctgaaacatctcatctactatcgcttcaac
actggtcctgtgggcaaaggtccaggctgtggcttctgggctcctggctggagagtttgg
ctcttcttcatgagagggatcacaccgctgctggagaggtggctgggaaatctgctggcc
agacagtttgaaggacgtcactctaagggtgtagccaagactgtgaccaagcagcgtgtg
gagtctcactttgacctggagttgcgtgctgctgtgatgcacgacatcttggacatgatg
cctgagggtatcaagcagaacaaagccagaaccatcctgcagcacctcagcgagtcctgg
aggtgctggaaggccaacatcccctggaaggtgccaggcctccccacacccatcgaaaac
atgatcctgcgctacgtaaaggccaaagctgactggtggactaacaccgctcactacaac
cgtgagcgaatccgccgtggtgccactgtggacaagacagtgtgtaagaagaacctgggg
aggctgacccgtctgtatctgaaagccgagcaggagagacagcacaactacctgaaggat
ggcccttacatcacagctgaggaggcagttgccatctacaccaccactgttcactggctt
gagagtcgcaggttttcgcccatcccgttccctccactgtcctacaaacacgacaccaag
ctgctcatccttgcccttgaaagactcaaagaggcatacagtgtgaagtctcggctgaac
cagagccagagggaggagctggggctgattgagcaggcgtacgacaatcctcacgaggct
ttgtccaggatcaagcgtcacctgctaacacagagagccttcaaagaggtgggaatcgag
ttcatggacttgtacagccacctggtgcctgtgtatgatgttgagcctctggagaagatc
acagatgcctacctcgaccagtacctgtggtatgaggctgacaagcgacgcctcttccca
ccctggatcaaacctgcagacaccgagcccccgccactgctggtctacaagtggtgccaa
ggaatcaacaacttgcaggacgtgtgggagactgctgaaggagagtgtaatgtgatgctg
gagtctcgctacgagaagatgtacgagaagatcgatctgacactgctcaacaggctgctg
cgtctcattgttgaccacaacattgctgattacatgacggccaaaaacaacgtggtcatc
aactacaaggacatgaaccacaccaactcttatggcatcatcagggggctccagtttgcc
tcattcatcgtgcagtactatggcttggtcatggacctgctggtgcttggtctgcaccgc
gccagtgagatggcaggtccacctcagatgcccaatgacttcctgagcttccaggacaca
gcaacagagagcgctcaccccatcagactgtactgtcgctacatcgatcgcatccacatc
ttcttcagattttctgctgatgaggccagggatctgatccagaggtacctcacagagcac
ccagaccccaacaacgagaacatcgtaggctataacaacaaaaagtgttggccccgtgac
gcccgcatgaggctgatgaaacatgatgttaaccttggccgtgctgtcttctgggatatc
aagaatcgtctgcccagatcggtgaccacggttcagtgggagaacagctttgtttccgtc
tacagcaaagacaaccctaacctgctcttcaacatgtgtggctttgagtgtcgtatctta
cccaaatgccgcaccagctacgaagagttcacgcacaaggatggtgtgtggaatctgcag
aatgaggtcaccaaagagagaacagcccagtgtttcctgcgtgttgatgatgaatcaatg
caacgcttccacaacagagtgcgtcaaatcttgatggcttcaggatccaccacattcacg
aagattgtgaacaaatggaacacagccctgatcggtctgatgacatatttccgagaggct
gtagtcaacacacaagagcttctggacctgctggtgaagtgtgagaacaagatccagacc
cgtataaagatcggtctgaactccaaaatgccaagtcgctttcctcctgtggtcttctac
acccccaaagaactgggtggccttggtatgctgtccatgggccatgttctgatcccacag
tctgacctccggtggtccaagcagacagatgtgggtatcacccacttcaggtctggaatg
agccatgaagaagaccagctgattcctaacctgtatcggtacattcagccatgggagagt
gagttcattgactcccagagagtttgggctgaatatgctctcaaaagacaggaggccatt
gcccagaacaggcgtctgacccttgaggatttggaggactcatgggacagaggaatccct
cgtatcaacacacttttccagaaggacagacacacactggcctatgacaaaggctggaga
gtcaggacagacttcaaacagtaccaggtgttgaaacagaatccgttctggtggactcac
cagagacatgatggcaaactgtggaacttgaacaactaccgcacagatatgatccaagcg
ctgggcggtgtggagggcatccttgaacacacactctttaaaggcacttacttccccact
tgggagggtctcttctgggaaaaggccagtggttttgaggagtccatgaaatggaagaag
ctgaccaatgcccagaggtctggtctgaaccagatccccaaccgtcgcttcactctttgg
tggtcacccaccatcaacagagcaaatgtgtacgtgggtttccaggtacagcttgacctg
actggaatcttcatgcacggcaagatccccactctgaagatctccctcatccagatcttc
agggctcacttgtggcagaagatacacgagagcattgtcatggatctctgtcaggtcttt
gatcaggagcttgatgctctggagattgagacagtgcagaaagagaccatccatcccagg
aagtcatacaagatgaactcatcctgtgcagacatcctcctctttgcctcttacaagtgg
aacgtctcccgaccatctctgcttgcagactccaaggacgtgatggacagcaccaccaca
cagaagtactggatcgacattcagctgcgctggggcgactatgactcacacgacatcgag
cgctatgccagagctaaattcttggactacaccacggacaacatgagtatctatccatcc
cccacaggagtgctgattgctatcgatctggcttacaatctccacagtggttatggtaac
tggttccctggaagcaagcctttgatccagcaggccatggccaaaatcatgaaggccaac
cctgccctgtatgtgctcagagaacgcatccgcaaaggtctgcagctgtactcctctgag
cccactgagccctacctgtcctcacagaactatggtgaacttttctccaaccagatcatc
tggtttgtggatgacaccaacgtgtaccgagtcaccatccacaagacctttgagggaaac
ttgaccaccaagcccatcaatggcgctattttcatcttcaacccaaggactggtcagctc
ttcctcaagatcattcacacctctgtgtgggctggacagaaacgtctggggcagctggcc
aaatggaagacggctgaagaagtggctgccctgattcgttccctccctgtggaagagcag
ccaaaacaaatcattgtaaccaggaagggtatgctggaccctctggaggtccacttgctt
gactttcccaacattgtgatcaaaggctctgagctgcagctgcctttccaggcctgtctg
aaggtggagaagtttggagacctgatcctgaaggccacagagcctcagatggtgctgttc
aatctgtacgatgactggctcaagaccatctcctcgtacacagccttctccagactgatc
ctgatcctcagagcactccatgtgaacaacgatcgtgccaaggtgatcctgaaacctgac
aaaacaaccatcactgagccccatcacatctggcccacactcacagacgaggagtggatc
aaggtggaagtgcagctcaaggatctcattctggcagattacggcaaaaagaacaatgtg
aacgtggcctcactcactcagtctgagatccgtgacatcatccttggtatggagatctct
gctccatcacagcagcgtcagcagatcgcagagattgagaagcagaccaaagagcaatca
cagctcactgccacacaaaccagaactgtcaacaagcacggtgatgaaatcatcacctcc
accacctccaactacgagacccagaccttctcctccaagactgagtggagagtcagggct
atatcagctgccaatctccatctccgaaccaaccacatttacgtgtcatctgatgacatc
aaagagacgggctacacctacatcctgccgaagaacgtcctcaaaaagttcatctgcatc
tcagatctgcgagcacagattgcaggctacctgtacggcaccagcccaccagataaccct
caggtgaaagagatccgttgtatcgtcatggtaccccagtggggcactcaccagactgtc
caccttcccaatcagctgcctggtcacgagtacctaaaagaaatggagcctctgggctgg
atccacactcagcccaacgagtctccccagctgtccccacaggatgtcaccacccatgcc
aaagtcatggctgacaacccctcctgggatggagagaagaccatcatcatcacctgcagc
ttcacccctggctcatgcacgctcacagcctacaagctgacacccagtggatatgagtgg
ggtcgacagaacacagacaaagggaacaaccccaaaggctacctgccgtctcactatgag
agggtacagatgctgctctctgatcgtttcctgggcttcttcatggtgcctggccaggtg
tcctggaactacaacttcatgggtgtgcgccatgacccaaatatgaagtacgacctgcag
ctcgccaacccgaaagagttctaccatgaagtccatcggccttcgcacttcctgaacttt
gcctcactgcaggagggtgagatctacaacgccgaccgtgaagacatgtatgcttga
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integrated database retrieval system
