Halichoeres trimaculatus (threespot wrasse): 141797550
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Entry
141797550 CDS
T11192
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04137
Mitophagy - animal
htc04140
Autophagy - animal
htc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141797550 (hif1al)
04137 Mitophagy - animal
141797550 (hif1al)
04148 Efferocytosis
141797550 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htc03000
]
141797550 (hif1al)
Transcription factors [BR:
htc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
141797550 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
141797550
NCBI-ProteinID:
XP_074535128
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MEENEKMVPVKRTSSEQRKLRSRDAARCRRSKETEVFYELARTLPLPRRVSTQLDKAAIM
RVALSFLSLRRLLRPETESLKMETEDEDEEEEDPMDTFYPQVLAGFVLVMSEEGDMMYLT
ENVSKHIGITQLELLGQSIYDFVHPCDQEELRDLLAPRPGLSKKPLAEQSSERNFFMRMK
STLTSRGRTVNIKSADWKVLHCTGHMRPFSHGSTPPPAARVMTLLCEPIPHPSSVEFPLD
THTFLSRHSMDLRFTHCEGRVMELTGYKPEDLIGCSAYEFHHALDSDHVNKSLHTLLSKG
QVSTSCYRFLTNGGGYVWAQTQATVLYNSKTSHPEAVVCLNFILSGVEQPDAIFSLEQIR
SSRSPRAEEVPPSDISSSNGERLGSDAALKRTSSATDLFSKLKEEQEELLRVAPAAADTV
IPLTGDSAELSFYSPPTPDAMPANPQDLCSPKLRQLLAPIFEPLTPPLSTSSSSTPPLSP
ASSPEPQSPATDDSMDTSEVEKFFAVCSVDDLKSDEILEGVDLEMLAPYISMDDDFQLTF
LGSSLTGEAENPSSLSLSEPTAMTPDVSVRGKRAHGLDEEIPSELMIQAKRQKQEASSIE
EELLLSHRLLDCLQETDQSDLVLLRGSGGRSQLLTDRDPLFGGVQGLCDTAALMGDMFSS
RPSKLPPPLPPSLSAMT
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaacgagaagatggttccggtgaaacggaccagttcggagcagaggaagctg
cgttctcgtgatgcggcccgatgcaggaggagtaaggagacggaggttttctacgagctc
gcccgcacccttcctctcccacggcgggtctccacgcagctggacaaagccgccatcatg
agggtggccctcagcttcctgtcactgcggcgtctcctgcgacccgagactgagagtctg
aaaatggagactgaagatgaagatgaggaggaggaggatcccatggacactttctaccct
caggtgctcgccggcttcgtcctggtgatgtcagaggagggcgacatgatgtacctgacg
gagaacgtcagcaaacacatcggcatcactcagctggagctcctgggtcagagcatttat
gacttcgttcatccctgtgatcaggaggagctcagagacctgctcgctccacgtccaggt
ctgagtaagaaacctttggctgagcagtcgagcgagagaaacttcttcatgaggatgaag
agcactctgaccagcagggggcgcaccgtcaacatcaagtctgctgactggaaggtcctc
cactgcaccggacacatgcgtcccttcagccacggctccacgccgccccctgctgcccga
gtgatgaccctgctgtgcgagcccatccctcacccctccagcgtggagttccccctggac
acacacaccttcctgtcccgccacagcatggacctgcgcttcacacactgcgagggcaga
gtgatggagctgactggatacaaacctgaggatctgattggctgctcggcgtacgagttt
caccacgcgctcgactcggaccacgtcaacaagagcctgcacaccttgctctccaaaggt
caggtgagcaccagctgctaccgcttcctgaccaacggcggcggatacgtgtgggcgcag
actcaggccaccgtcctctacaacagcaagacgtcacatcctgaggccgtggtctgcctc
aacttcatcctcagcggcgtggagcagccagacgccatcttctccctggagcagattcgc
agcagccgctcgcctagggcagaggaagtcccgccctctgacatcagcagctcgaacggc
gagcgcctgggctctgacgccgctctgaagagaaccagcagtgccacagatctcttctcc
aagctgaaggaggagcaggaggagcttctccgggtggcgcctgcagcggcggacacggtc
atcccgctgacaggagattcagccgagctgtccttctacagcccgcccactccggacgcc
atgccggcgaatcctcaggacctgtgctcgccaaagctccgacagctcctggcgcccatc
ttcgagcccctcaccccccccctgtccacatcctcatcctcaaccccccctctgtcacca
gcatcctcacctgagccccagagccccgccacggacgactccatggacaccagcgaggtg
gagaagttcttcgccgtttgctcggtggatgatctgaaaagcgatgaaatcctggagggg
gtggatctggagatgctggctccttacatctccatggacgacgacttccagctcacgttc
ctcggcagcagtttgacgggggaagctgagaatccttcatcgctgtcgttgtctgagccg
acggcgatgactcctgatgtctctgtgagggggaaacgggctcacggcctggacgaggag
attccctctgagctgatgattcaggccaagagacagaaacaagaagcttcttccatagaa
gaggaactcctgctcagccacagactgctggactgtctacaggaaacggaccaatcagat
ctcgtcctgctgcgggggtcaggtgggcggagccagctgctcacagacagagaccctctg
ttcgggggcgttcagggactctgtgacactgcagcgctgatgggcgacatgttctcgtcc
cgtccttccaaactgccgccgccgctgccgccatccctctcagcgatgacctaa
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