Halichoeres trimaculatus (threespot wrasse): 141798201
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Entry
141798201 CDS
T11192
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03440
Homologous recombination
htc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141798201 (brip1)
03460 Fanconi anemia pathway
141798201 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htc03400
]
141798201 (brip1)
Enzymes [BR:
htc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
141798201 (brip1)
DNA repair and recombination proteins [BR:
htc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
141798201 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
141798201 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
141798201
NCBI-ProteinID:
XP_074536130
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MALSPVEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNNGQHCLLESPTGSGKSLALLCSA
LGWQHSQLAKLHQGASPGVDKSQPDKSFGDYKKPNVTPCQCVCHSNVKRPAATPASTPAS
KPPVVDLTESPLKDTAQPMSPAPGKGSAPEESQPKKQSLASRLSEKFQSFLSSDHEKDDD
FQPDRKRIRTTEPKSRKRQRLEKGVVFIDDDEDVPELEYEPLGFQSWTTEAPTPAAPVSS
SCCTPEPCSRCSCATTKDTAKDKNQEGIKKMRKIFFGTRTHKQITQITHELKRTVYSGTP
MTILSSRDHTCVNPEVAPHASRNERCKELLEAKDGKSCRYYHGVARMRDQTSLQRAHGLH
QAWDIEDLVSLGKRLRACSFFAARELMQEARIIFCPYNYLLDPMIRQSLDIDLTGQILVL
DEAHNIEDCARESASFTLDNNNLLTCRDELDGMVKINIRRSKHEPLRDFCYSLINWIQES
QCMLTERGFESASKVWNGSDILVIFHSLGITADTFNILKENLAAVLEKEERVGVVNGKED
MVQVPTISSASSSVLKGLFVVLDFLFRDNSRFADDYRVALQRSYAWTNKVPPDVPDAQGY
FVRPRQRQRQSVRVKTEVLTLSFWCLNPAVAFSDLSGSVHSIVLTSGTLSPMGSFSSELG
VKFTIQLEANHVINKSQVWVGTVGAGPQGRKLCATFQHAETYAFQDEVGALLLHVCQAVT
KGVLCFLPSYKMLDKLRDRWINTGLWEKLELKKTVITEPRGGAKGDFDELLHTYYDAIKY
CEERDGALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSR
GLLPGHRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRYKNNPNKYITGLSKWVRQLV
QHHDTFNDAMQSLVAFSQLQQKTETAPTDSQTLSSTAHSSPNGHLSLPAEDQSLTKTSEP
QTPGPYEKLSEPQSPTAVSFFSHTQLKAEQKEREERLQTISSPQTEPRPRQNSKAQPFYS
IFTSSPVSNAFKRPIFKEKTPNNSEQHSETSNHCENKENQQISEDMGLKQEAPARADDMK
KEPNNHITEPLLSCDSEPPAAENPDEDGEDEEDQTIFFTPELFEEEENGGSPQKELKAPQ
KLEGPAWLSEDAEQPVVLNEQSDSSGCMESSEPPQGHRGEGEEGGQLENQSRQKEKKLHR
LSRSRQKAPSNPTGNE
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggctctttcccctgtggagtacactattggaggggtgaagatcaactttccctgcaag
gcgtatccctcccagttggctatgatgaactctattgtgcgaggactgaacaacggacag
cactgtttgctggagagtccaactggaagtggaaagagtttagccttgttgtgttcagct
ctgggctggcagcattctcagttagctaaactacatcaaggagccagtcccggagtggac
aagagccagccagataaaagctttggagactataagaagccaaacgtcaccccgtgtcag
tgtgtctgtcacagcaatgtcaagaggccagcagctactcctgcctcaacacctgcctcc
aaacctcctgttgtagacctgactgagtcaccactcaaagacacagcacagccaatgtcc
ccagcacccgggaaaggctcagcaccagaggagtcacagcccaagaaacaatccttagca
tctcgtttgtctgagaagtttcaatccttcctcagctctgaccatgagaaagatgacgac
tttcagcccgacaggaaacgtatccgcacgaccgagcccaagagccgtaagaggcagcgt
ctggagaagggagtggttttcattgatgatgatgaagatgtgccggaactggagtatgag
cctttaggttttcaaagttggaccacagaggctccgactcctgcagctcctgtgtcttca
tcgtgctgtacccctgaaccctgctcccgctgctcctgtgctacaaccaaagatactgcc
aaagacaaaaaccaagaaggaataaagaagatgcgtaagatcttcttcggcacacgtacg
cacaaacagatcacacagatcacccacgagttaaagcgcaccgtgtactccggcacgccc
atgaccatcttatccagcagagatcacacctgtgttaacccagaggtggcgccacatgcc
agccgcaatgaacgctgcaaggagctgctggaggccaaagatggcaagtcatgccgttac
taccacggtgttgcgaggatgcgggaccagaccagcttacagcgtgctcatggcctccat
caagcatgggacattgaggacttggtctcactgggcaaacggctccgtgcgtgctccttc
tttgctgctcgtgagctgatgcaggaggccaggatcatcttctgcccatataactaccta
ctggacccaatgatcagacagagcctggatattgacctgactgggcaaatcttggtgctg
gatgaggcccacaacattgaagactgtgcaagggagagtgccagcttcactttagacaac
aacaatctgctgacgtgcagggacgagctggatgggatggtcaaaatcaacatcagacgc
tccaaacacgagccgctcagagacttctgctacagcctcatcaactggatccaggagagc
cagtgcatgctgacagaacggggatttgagagtgccagtaaagtctggaatgggtcagat
atactggtcatctttcacagccttggcatcaccgctgatacctttaacattctgaaggaa
aacttggcggcggtgttggagaaagaggagcgtgttggcgtggttaacggcaaagaggac
atggtgcaggtaccgaccattagctctgcttcctcatctgtcctgaaaggtttgtttgtg
gttctggacttcctcttcagggacaacagcagattcgctgatgactaccgtgtggctctg
cagaggagctacgcatggacaaacaaagtcccacctgatgttccagacgctcagggatat
tttgtccgacctcgtcaaagacaacggcagagcgtccgcgtaaagacagaagtcctgacg
ctcagcttctggtgccttaaccctgctgtggctttttcagatctgagtgggtctgtgcac
agcatcgtgctcacatcaggaaccctgtcacccatgggatccttctcctctgaactcggg
gtaaagttcaccatccagctggaggcaaaccacgtcatcaacaagtctcaggtttgggtg
ggaactgttggtgcaggacctcaaggtagaaaactctgtgccactttccaacatgctgaa
acgtatgccttccaggacgaggtgggggctctgctgctccacgtctgccaggctgtgacc
aaaggcgtgctctgcttcctgccttcttataagatgctggacaagctgcgagaccgatgg
atcaacacaggtctctgggagaagctggagctgaagaagactgtgatcacagagccgcgg
ggcggagccaagggagactttgatgagctgcttcacacgtactatgacgctatcaaatac
tgcgaggaaagagatggtgctctgctcatcgccgtctgtagggggaaagttagtgaaggt
ctggacttcacagatgacaacgccagggctgtggtcaccattggaatccccttcccgaac
atcaaagaccttcaggtggagctgaagatgaagtacaatgaccaacactgcaagtccaga
ggtcttcttccaggtcaccgttggtatgagatccaggcctacagagctctgaatcaggcc
ctggggagatgcattcggcacaggaacgactggggggccctgatcttagtggacgatcgt
tataagaataatcccaacaagtacatcacaggtctgtctaaatgggtccgtcagctagtc
cagcatcacgacactttcaacgacgccatgcagtctctggtggcgttctcccagctgcag
cagaagacggagacggcccccacagacagtcagaccctcagctccaccgcccactcttct
ccaaatggtcacctgtccttacctgcagaggatcagagtttaactaagacctcagaacct
cagacaccaggtccatatgagaaactgtctgagccccagagccccacggccgtcagtttt
ttctcccacacacagttaaaggctgaacagaaagagagggaagagcgtttgcagacgata
agcagcccacaaactgagccccgaccccgtcagaatagcaaagcccagcctttctacagc
attttcacctccagtcctgtcagcaacgcgttcaagaggccgatcttcaaagaaaaaaca
cccaataactctgagcaacactctgaaacatcaaaccattgtgagaacaaggagaaccag
cagatctctgaggatatgggtcttaaacaagaggctccagcccgtgcagatgacatgaaa
aaagagcctaacaaccacatcacagagcctcttctcagctgtgacagtgagccacccgct
gctgaaaacccagatgaggatggggaggatgaagaggaccagaccatcttctttacccct
gagctgtttgaggaagaggagaacggaggcagccctcaaaaagagttgaaggcaccacag
aagttagagggccctgcctggctgtcagaggacgcagagcagcccgtggttttgaacgag
cagagtgatagttcaggctgtatggagagctcagagcctccacagggacacagaggagaa
ggtgaggagggagggcagctggaaaaccagagcaggcagaaagaaaaaaagctccacaga
ctgtcccggtctaggcagaaagctccctccaaccctacaggtaatgaataa
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integrated database retrieval system
