Halichoeres trimaculatus (threespot wrasse): 141799693
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Entry
141799693 CDS
T11192
Symbol
prpf6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141799693 (prpf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
htc03041
]
141799693 (prpf6)
Spliceosome [BR:
htc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
141799693 (prpf6)
Complex C
U5 SnRNP specific factors
141799693 (prpf6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
Suf
TPR_16
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_17
TPR_2
TPR_8
TPR_1
ARM_TT21_C
TPR_9
ARM_TT21_5th
Mt_ATP-synt_B
HH_EMRA
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
141799693
NCBI-ProteinID:
XP_074538109
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MASASTKQAPKIVSKASAGGAGAAGVGGGPPIMPLASPLMGKKKKPFLGMPAPLGYVPGL
GRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQDDDDEDLNDTNYDEFNG
YAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERRELREKEEIEKYRMERPKIQQQFS
DLKRKLAEVSEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFSKHLQSGDKNTSVDPL
QGLGGLNTPYPGSMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSVSGQTVVDPKG
YLTDLNSMIPTHGGDISDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI
MKGTEMCAKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDVRAKKRV
LRKALENVSKSVRLWKTAVELEEPEDARIMLSRAVECCPTSVELWLALARLETYENARRV
LNKARENIPTDRHIWITAAKLEEANGNTQMVDKIIDRAITSLRANGVEINREQWIQDAEE
CDKAGSVATCQAVIRAVIGIGIEEEDRKHTWMEDADSCVAHGALECARAIYAHALQVFPS
KKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAEDVPAARSILA
LAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIE
AAQELCTEALKHYEDFPKLWMMRGQIEEQCENMDKAREAYNQGLKKCPHSVSLWLLLSRL
EERVGQLTRARAILEKARLKNPQCPELWLESVRLEFRAGLKNIANTLMAKALQECPNSGI
LWAEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFLRTVKIEP
DLGDAWAFFYKFELQHGTEEQQEEVRKRCDNAEPRHGELWCAESKHVLNWQKKTGEILAG
VASKLKNTF
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcttcaacaaaacaagcgcccaaaattgtctccaaagcgtctgctggagga
gccggggcggcgggggttggtggcgggcccccgataatgccgctcgcctctcccctcatg
gggaagaagaagaagccgttcctggggatgcccgcgccgctcggatacgtccccggtctg
ggcagaggtgccactggtttcaccacccgatctgatatcggtcctgctcgtgatgccaac
gatccagtggatgaccgacatgcacctccagggaaaaggacagttggggaccaaatgaaa
aagaaccaggacgatgatgatgaagatctgaacgacactaactacgatgagtttaacgga
tatgctggtagcttgttctccagtggaccctatgagaaagacgatgaagaagcagatgcc
atatacgcagcactggacaagaggatggatgaaaggcgcaaagaaagaagggaactgaga
gaaaaagaagaaatagagaaatatcgtatggagcggcctaagattcagcagcagttctca
gatcttaagagaaagttggcagaggtgtcagaagaggagtggctgagcatccccgaggtg
ggggatgccaggaacaagcgccagagaaatccccggtatgagaaactcaccccagttccc
gacagcttcttctccaaacacctgcagagtggagataaaaacacctccgttgatcctctg
caagggctgggaggtctgaacacaccttacccaggaagcatgaccccaggtttgatgaca
ccaggaacaggagagctggacatgaggaaaattggccaggccaggaacacactgatggat
atgaggctcagccaggtgtctgactcagtgagcggacagacagtggtagaccccaagggt
tacctgacagatctcaactccatgatccccacacatggaggagacataagtgacatcaag
aaggctcgtctgctgctgaagtcagtgagggagaccaatccccaccacccgcctgcctgg
attgcttctgccaggctggaggaggtgactggcaaactgcaggtggcgaggaacctgatc
atgaaaggcacagagatgtgtgctaagagtgaggatgtgtggcttgaggcagctcggctc
cagcctggcgacacagctaaagccgtcgtagcccaggctgtccgccacctgccacagtct
gtgcgcatctacatcagggctgcagagctggagactgacgttagggccaagaaacgagtt
ctcaggaaggccctggagaatgtttccaagtcggtgcggctgtggaagacggctgtggag
ctggaggagccagaggatgccaggatcatgctgagccgagctgtggagtgttgcccgacc
agcgtggagctgtggctggcactagcccggttagagacgtacgaaaacgcccgccgtgtc
ctgaacaaagcccgagaaaacattcccacagatcgccacatctggatcactgccgccaag
ttggaggaggcaaatggtaacacgcagatggtggacaagatcatcgacagagcgatcact
tctctgcgtgccaatggtgtggagatcaacagagagcagtggattcaggatgcagaggag
tgtgacaaagctggtagtgttgccacctgtcaggccgtgataagggcagtcattgggatt
ggaattgaggaggaggatcgcaaacacacctggatggaggatgcagatagttgtgtggcc
catggcgctctggagtgtgcccgggctatctacgctcacgctctacaagtgttccccagt
aagaaaagtgtctggcttcgagctgcctactttgagaagaatcacggcaccagggagtct
ttagaagcactgctccaaagagctgtagctcactgccccaaagcagaagtcctgtggctg
atgggagctaagtccaagtggctggctgaggatgtgcctgcagcaagaagtatcctcgct
ttggccttccaggctaacccaaacagtgaggagatctggcttgctgctgtcaagctggag
tctgagaataacgagtatgagagagccagacgactgctggccaaagcccgcagcagtgcc
cctacagccagggtattcatgaagtcagtgaagttggagtgggtgttgggaaacatcgaa
gcagcgcaggagttgtgcacagaagccctgaaacactatgaggacttccccaagctttgg
atgatgagggggcagattgaagagcagtgtgagaacatggacaaggccagagaggcgtac
aaccaggggttgaaaaagtgtccccactcagtgtccctgtggttgctgctgtctcgtctt
gaggagcgagtaggacagctgaccagagccagagcaatcctggagaaagcccgactcaag
aacccacagtgccccgagctctggttggagtctgtgcgtctggagttcagggctggactg
aaaaacatcgccaacacgctgatggctaaagccctgcaggagtgccccaattcaggtatc
ctgtgggctgaggcagtcttcctggaggccagacctcagaggaagactaagagcgtggat
gctttgaagaagtgtgaacatgatccccatgtcttgctggctgtagccaagttgttttgg
agtgagcgcaagatcaccaaagccagagagtggttcttaagaacagtgaaaattgaacca
gaccttggagatgcatgggctttcttttacaagtttgagctgcagcacggcacagaggaa
caacaggaagaggtgcgcaagcggtgcgataatgctgaaccccgccatggagagctttgg
tgcgccgagtccaaacatgtcctgaactggcagaagaagacaggagagatcttagcgggg
gtagccagcaagctcaagaacaccttttaa
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