Halichoeres trimaculatus (threespot wrasse): 141800301
Help
Entry
141800301 CDS
T11192
Symbol
arid1aa
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141800301 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htc03000
]
141800301 (arid1aa)
03021 Transcription machinery [BR:
htc03021
]
141800301 (arid1aa)
03036 Chromosome and associated proteins [BR:
htc03036
]
141800301 (arid1aa)
Transcription factors [BR:
htc03000
]
Eukaryotic type
Helix-turn-helix
ARID
141800301 (arid1aa)
Transcription machinery [BR:
htc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141800301 (arid1aa)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
141800301 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
141800301
NCBI-ProteinID:
XP_074538835
LinkDB
All DBs
Position
Unknown
AA seq
2304 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDREPKEDSVPGEKQSDKKQQGLDSGSPGRGDLQDGADG
GNAGGGGEPEMKNGNGNPPRANNNNQNDSVGPEGNNHPSLVHHHGPAFPPPSYGYSQHYG
RAPFHQHGGQQSPGMAAAAGPVVQSSNMMDPYQPNSHEHGFSNHQFNNYNPFPNRTPYPG
QAYAMNSPRSTQAPTAGGQPANVKQQQPPAGGPTAMAGSYNNQRYNIGNPQPTSTPTLNK
LLTSPSSTRAYPNYPSGDYSSPEGASKGPADMGSSGLYGGSNPGWQQRSHLPSPMSPGSA
GQPLARTQPPGSMDPMGKIRGQPYGAGSPYSQQSQQGPPSGPQQGPGYPGQGYGSPGPQR
YPVGMQGRTPGSMGGMSYGPQMGSYGQQGPGGYGPQGQAPYYGQSGQAPHQSQQQTPYSQ
APPGQPAGQTPYPGQPHPPPNSAQHPQGGPPYQQTHMPPQSQGPLPGQPQGPPHSQPSYP
QTSAPQSAQSLYAQQQGPPSQAQQQQQPSSQDAPGSQGQSNYPGSTQGPQQPPSQQQQAQ
SQPPQPPGHSQHPQGQPAAYSQNPQQQQQAQQSPYQRFPPPPQQEVSQDSFQSNPPSSTQ
PKSVPEDSQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNQAQSPFSPH
TSPHLPGIRGPSPSPAGSPASASTPRTGPLSPANMPGTQMPPRPSSVQSDGSLHPAMSQS
PMAQDRGFMQRNPQMPPYGSPQSASALSPRQSSGGQMHPGMGPYQQSNSMGGYGQQGGQY
GPQGYPRQPGYGNMPNANYPGPGMGPINPMAGQGGGQPYAGMPPGRMPPNQMGARPYGPN
MGPNMGPNMGPNMPPNMGNMPPQVGSGMCPPPGMNRKPQDPAAMQHPAANSMHNRMPGYP
NMSPGMMGSGPPYGPPMNNMPGMINTQGGSPYPMGPNMANNSGGMAPSPEVNNKINNKVD
GAQTPKPETKSKKSNSSTTTNEKITRLYELGPEPDRKMWVDRYLAFIEEKAMAMTNLPAV
GRKPLDLFRLYISVKEIGGMAQVSKTKKWRDLATSLNVGTSSSAASSLKKQYIQCLYAFE
CKIERGEDPPPEIFTDNKKNQAAKVQPPSPASLCSTAGSGSLQGPQTPQSTSSSMAEGGD
LKPPTPASTPHTQMPPMPPGPRSSVNLQDPFSEGSDPAFPRKNMTPNSAYQPGMNTPDMQ
GRMGAYEPNKDPFGNMRKVGEQFLPANQGPNSGMGDHQQQQQQQQQPPFNRGAPGAMGTM
PVGPRQQYPYGPGYDRRSEQGMGPEGNMGSGAPQPNPMMPANADTGMYSPNRFPPQQPRH
DSYGNQYPGQGTPPTGSYPNQQPGMYPQQQQSYKRPVEGGYPPSKRHEAEYSGPFHGGQQ
PPQQQQGGTSAPSPGQQESYNQYSSSGPFPGSDRRPPGPGNQFPFPFGRDRMQGAAGPNA
QTNMPPQMMQSGPEGPQGAMWQGPRDMNYQNYPSRQGGPSGPPQGPGYPGMNRSEEMMSS
EQRMNHDGQWGGQVGPRQPPYGPGGPGQPMPRSVQSNYQSPQGVQNHIPQVSSPASMPRP
MESRTSPSKSPYMHGVMKMQKAGPPVPASHIVPPPVQSPLVRRDMPFPPGSIEASHPVLK
PRRRLTVKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSSISTFDLNTLPGFLE
LVVEYFRRCLIEIFGILREYEVGDPGQRTLLDPDALKRDWENMEEEEPSTQDMEQEEEEE
EEEDDEEEGERETVEPVFVKEEGEQSSESGGHDEKTENEERKTKSSSSDQTSSSQSLADH
ERPRQASKFDKFPLKVVRKKDPSVAGQSNNYGKVQEFDSGLLHWSAGGGDSTEHIQTHFE
PCREFLEPRERLPVPPALLRRRLPEDEIQINCLLAEEEKSKPQDEEERPNETPSTQRSEE
SVKAGSSVGREEEGKTDSEQKTVEKGAKSHQENNKPIYPSSSILTQKAKLTGTILEDEPH
SKDEGPLVALANWQDSLARRCICVSNIVRSLSFVPGNDHEMSKHPGLLLLLGRLILLHHR
HPERKQAPLTYEKDEDSDEGVGQRDEWWWDCLGLLRENTLVTLANISGQLDLSLYPESIC
LPLLDGLLHWAVCPSAEAQDPFPTLGPHSALSPQRLVLETLSKLSIQDNNVDLILATPPF
RRLEKLYGNLVRLIGDRKVAVCREMAVVLLANLAQGDTMAARAIAVQKGSVGNLLGFLED
SLAATQLQQSQSSLLHLQGMHFEPTSPDMMRRAARALHALAKVEENHSEFTLHESRLLDL
SVSPLMNSLVSHVICDVLFLVGQS
NT seq
6915 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactcttaacactagcccgccttccgaactcaag
aagccggatcgagaacccaaggaggattcggtaccgggggagaagcagtcagacaaaaag
cagcagggcttggacagcggatcgccgggccggggggatctgcaggacggggccgacggt
ggaaatgcagggggaggaggggaacctgagatgaagaacgggaatgggaacccgcccagg
gctaacaataataaccagaatgactctgttggaccggagggaaataaccatcccagtttg
gtgcatcaccacggacccgcttttcctccaccttcgtacggatacagtcagcactacggt
cgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcgggt
ccggtcgtgcagtcgagcaatatgatggacccgtatcaacctaattcgcacgagcatggc
ttttcgaaccaccagtttaacaattacaaccctttcccgaacaggactccgtatcccggc
caggcttacgccatgaactcccctcgcagcacccaggcgccgacagctggggggcagcca
gctaacgttaagcagcagcagccaccagcgggaggacccacggcgatggctggatcttac
aataaccagagatataacattggaaacccccaaccaacttccacaccgacacttaacaag
ctcctaacctctcctagctcaacacgggcttatccaaactacccgtccggcgactacagc
agcccagaaggagctagtaagggaccagcagacatgggcagcagcggtctgtatggaggg
agcaacccgggctggcaacaaagaagccatctcccgtcacctatgagcccgggaagtgcc
gggcagccactagctagaacccagccgcctggttccatggatccaatggggaaaattaga
ggtcaaccgtatggagcagggagtccatacagtcagcagtcccagcaggggcctccatca
ggtccacaacaggggccaggatatcctggacagggctacggctctccaggtccacagcga
tatcctgtgggaatgcaaggacgcacacctggaagcatgggtggcatgtcgtatggtcct
cagatggggtcatatggacagcagggaccagggggttatggcccccaaggccaagccccg
tattatgggcagtcaggccaggcccctcaccagagccagcagcaaaccccctatagccag
gctccaccaggccaaccggctggccagacaccttacccagggcagccccatcctccgcca
aactctgcccaacacccccagggaggaccaccctatcagcagacccacatgcccccgcaa
tcccaggggccactgccaggccaaccgcaaggccccccacactctcaaccatcttatccc
caaacctcagccccacagtctgctcagtccctctacgcccagcagcagggtcctcccagc
caggcccagcagcagcagcagccaagttcccaggatgcccctggatcacagggccagtcc
aactacccaggatccacacaggggcctcaacaacccccctcgcagcagcagcaggcacag
tctcagcctccacagccaccaggacacagccaacatccgcagggccaacctgcggcttac
tcccagaacccgcagcagcagcagcaagcacaacagtcaccttatcagcgctttcctcct
ccacctcagcaggaggtttcccaggactcatttcagtccaaccccccttcatctactcag
cctaaatctgtcccagaagacagccaaggccgcccctccagccttccggacctgtcgggc
tccattgatgacctgcctacaggtacggagggtgccctgagtcctggtgtgagcacatca
ggtgtgtcgagcagccagggtgagcagagtaaccaggcccagtcacccttctctcctcac
acgtctccccacctgccaggcatccgaggaccttcaccctccccagctggctcccctgcc
agcgccagcacaccccgcacaggaccgctgtcacctgccaacatgccagggactcagatg
ccacccagaccttcaagtgtgcagtcggatggtagtctacaccctgcgatgagccagtcc
cccatggctcaggacagagggttcatgcagagaaaccctcagatgcccccctatggttcc
cctcagtcagcatctgcactatctccacgccagtcctcaggggggcagatgcatcctggg
atgggtccatatcagcagagcaactccatgggtggctatggacaacagggaggacaatat
ggcccccaaggttacccccggcaacctggctatggcaacatgcccaatgctaactaccct
gggccaggaatgggtcctataaaccccatggcaggacagggagggggtcagccgtatgct
ggcatgccaccaggaaggatgcctcctaatcaaatgggagcacgtccctatggccccaac
atgggccctaatatgggccccaacatgggtccaaacatgccccctaacatgggtaacatg
ccacctcaggtgggctcaggaatgtgtcctcctccaggcatgaacaggaagccccaggac
cctgcagccatgcagcaccctgccgccaactccatgcacaacaggatgccaggttacccc
aacatgtctcctggcatgatgggctccggcccaccctatggtcctccaatgaacaacatg
cctggaatgataaatacccaaggtggatccccgtatccaatggggccaaatatggccaat
aactcaggtggtatggcccccagtccagaggtgaacaataagattaacaacaaagttgat
ggggctcaaacacccaagccggagactaaatcaaagaagtccaactcttccaccacaacc
aatgagaagataacccgtctatatgagttgggaccagagccagacaggaagatgtgggtg
gaccgatatctggccttcattgaagagaaagccatggctatgaccaacctgcctgctgta
gggcggaaacctcttgacctcttccgactttatatctctgtaaaagagattggaggcatg
gcacaggtgagtaagacgaagaagtggcgtgatctggccacttctctcaacgtgggtaca
tccagcagtgctgccagttctttaaagaaacagtacatccagtgtctgtatgcctttgag
tgcaaaattgagcgtggtgaggaccctcctcctgagattttcactgacaacaaaaagaac
caagctgctaaggtccagcctccttctccagcatcactttgttcgacagctgggtcaggc
tctctgcagggtcctcaaactccccaatccaccagcagctcaatggctgaaggaggagac
ctgaagcctccaacccccgcctccacccctcacacccagatgcccccaatgccacctggc
cccagaagcagtgttaacctgcaggaccccttctctgaaggaagtgaccctgcgtttcca
cggaagaacatgacaccaaactcagcttatcagccaggcatgaacacaccagatatgcag
ggtcggatgggtgcgtatgaacccaacaaggacccatttggtaacatgcgaaaagttggc
gagcagtttcttccagctaaccagggccctaacagcgggatgggtgaccatcaacagcag
cagcagcaacagcagcagcctcctttcaacaggggggcgccaggggccatgggcacaatg
ccagtggggcctagacagcagtatccttatggaccaggctatgacaggagatcagagcaa
ggaatgggcccagagggcaacatgggctctggtgctcctcagccaaaccctatgatgcct
gccaacgccgacacggggatgtattcaccaaatcgcttcccaccacagcagccacggcat
gattcctatggtaatcagtatcctggacagggaacgccccctactggctcctacccaaat
cagcagcctggaatgtacccgcaacaacaacagagttacaagcgccccgtggaagggggt
tatcctccatcaaaacgtcatgaggctgagtacagcgggcctttccatggtggtcaacaa
ccacctcagcagcagcagggaggaacctctgctccgtctcctggacagcaggagtcatac
aatcagtacagcagcagtgggcctttccctggctctgatcgccgcccgcctggcccaggc
aatcagttccctttcccctttggtcgtgatcgaatgcagggagcagcagggccaaatgct
cagaccaacatgcctcctcagatgatgcagtcggggccagagggtcctcagggagctatg
tggcagggaccgcgtgatatgaactatcagaactacccaagccggcagggtggtcctagt
ggcccaccccagggaccgggttaccctggtatgaaccgctcggaagagatgatgtcatca
gagcagcgcatgaatcacgatggccagtgggggggacaagtgggcccacggcagccccct
tatggtccaggaggtcctggtcagccgatgcctcgctcagtacagtccaactaccagtcc
cctcagggcgtgcagaaccacattccacaagtgtccagccctgcttccatgccccgcccc
atggagagcaggacgtcacccagtaaatctccctacatgcatggagtcatgaagatgcag
aaagctggccctccggtgcctgcgtctcacatagtgccccctccagtgcagtcgccttta
gtaagacgagacatgcctttccccccaggatccatagaagccagccatcctgtcctgaaa
ccacgacggagactcaccgtcaaagatattggaactccagaggcttggcgagtcatgatg
tcattaaagtctggtttattggctgagagcacgtgggccttagacaccatcaacattctc
ctctatgatgacagcagtatttccacctttgatctcaacacgttgccgggctttcttgag
ttggtagttgagtatttcagacgctgcctcatcgagatctttggcattctgcgcgagtat
gaggtgggagatcctggtcagaggaccctacttgatccggatgccctcaaacgagactgg
gagaacatggaggaagaggaaccatcgactcaggacatggaacaagaggaggaggaagaa
gaggaagaagatgatgaagaggagggggaaagagaaacggtggagcctgtctttgttaag
gaggagggagagcagagttccgagtctgggggtcatgatgagaagaccgaaaatgaggag
aggaagaccaagagttcttcatcggatcagacaagctcatcgcagtccttagccgatcat
gagagacccagacaggccagcaagtttgacaagtttcccctgaaggtggtacgaaagaaa
gacccctctgtggcaggtcagtctaataactacggtaaagtccaagagttcgatagtggg
ctgcttcactggagtgcaggagggggagactcaacagaacacatccagactcactttgaa
ccctgcagagagttcttggaaccacgagaacgactacctgtgcctcctgctctgctgagg
cgaagactcccagaagatgagatacaaataaattgtttgctagcagaggaagagaaaagt
aagcctcaggatgaagaggaaaggccaaatgagacaccctcaacccagagatcagaagag
tcagtgaaggccggctcctcagttggcagggaagaggagggtaaaacagattcggagcaa
aagacagtagagaagggtgcaaaaagccaccaggagaataacaaacccatctatccctcc
agcagtattttaacacagaaggcaaagctgaccggcaccatcctggaggacgagcctcac
agtaaagacgaggggccgctcgttgctctggctaactggcaggattccttagctcgacgc
tgcatttgtgtctcaaacatcgtccgcagcctctccttcgtgccgggcaatgatcacgaa
atgtctaagcacccggggctcctactactgctcggacgcttgatcctgcttcaccaccgg
cacccagagcgcaaacaggcaccgcttacctacgagaaggacgaggattcagacgaggga
gtgggccagagggacgagtggtggtgggactgcttgggcctcctgagggagaatacactg
gtaactttggcaaacatctcaggccaactggacctctccctctaccctgaaagcatctgc
ctccctctgctggatggtcttctccactgggcggtctgcccctctgcagaggctcaggac
cctttccccaccctgggcccacacagtgctttatcccctcaaagactggtcctagagaca
ctaagcaaactaagcatccaagataacaatgtggacctcatcctggccactccacctttc
cggaggttggagaaactgtacgggaacttggtgcggctaataggagacaggaaggtggct
gtctgcagggagatggctgtggtcctcctggcaaatctggcacagggtgataccatggca
gcacgagcaatcgctgtacaaaaaggtagtgtaggcaatttgctgggtttccttgaggat
agcctggccgccacacagcttcagcagagccagagctctctgctacacctgcaggggatg
cacttcgagcccactagcccggacatgatgcggcgagctgcccgggctctgcacgcctta
gccaaggtggaggagaaccactcagagttcacactacacgagtcccgcctcctcgacctt
tcggtgtcccccttaatgaactcactggtttctcatgttatctgtgatgtactctttttg
gtcggccagtcatga
DBGET
integrated database retrieval system
