Halichoeres trimaculatus (threespot wrasse): 141800644
Help
Entry
141800644 CDS
T11192
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141800644 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
htc03041
]
141800644 (dhx16)
Enzymes [BR:
htc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141800644 (dhx16)
Spliceosome [BR:
htc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
141800644 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
Flavi_DEAD
nSTAND3
PWI
Motif
Other DBs
NCBI-GeneID:
141800644
NCBI-ProteinID:
XP_074539413
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MANLEQWVSDRLHDILGLSDRYVSQFMIGTARKASSHQDFVSRLEQTGTIDIDQSVISFA
QELYDKIPRKEVVEKASRAMEREAIEMDRKNRTYTLLEDSDSDGEAVKEKQKGKKKSKDK
DRGNKRKHIRQKKESESSSEDEAPKRENRNIKKDDEEEEEWEKEERERQQDIEERDAFAE
RVKLKDKERTRNIAERTDKKAYEEAQKRLKMAEEGQNNMLPELRKRSRWEYLKKREAEKL
EDLDAEIRDDEYLFSTDELTEREKKELEYKRTLRDLAKDYKKAGAKEQEERKNRYYMPEE
KRSKEVPQRDLELEETPMELGGEQGRWEEERLKTASLRFGAKKEREQGMKQEQDKYQLVL
EEDEMIDFVSTAMTMKGTRSEKDQEAPALSQAELNKQSMQEVRRSLPIYPYREDLLAAIH
EHQILVIEGETGSGKTTQIPQYLLEDGYTKGGMKIGCTQPRRVAAMSVAARVAQEMSVKL
GNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILF
GLIKDIARFRQDLKVLVASATLDTERFSCFFDDAPVFRIPGRRFPVDIFYTKAPEADYLE
ACVVSVLQIHVTQAPGDVLVFLTGQEEIEACCEMLQERCRRLGSKIAELLVLPIYANLPS
DMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESLIVTP
CSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGIN
DLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQ
YKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHMVLLNVYTQWVESGY
STQWCYENFIQFRSMRRARDVRDQLEGLMDRIEVEVVSSKDDSLPIRKAVTAGYFYHTAR
LSKGGYKTVKHQQTVYVHPNSSLFEEQPRWLIYHELVFTTKEFMRQVIEIDSGWLLEVAP
HYYKSKELEDSSSKKMPRKQGKTKEELG
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctggagcagtgggtgagtgaccgtctccatgacatcctcgggttgagtgac
agatatgtttctcagttcatgatcggcactgcgcgtaaagcatcgagtcatcaggacttt
gtgagtcgtcttgagcagacgggaacaattgacatcgaccaaagtgtgatttcctttgct
caagagctctatgacaagattcctcgcaaggaggtagttgaaaaagcatcccgggcaatg
gagcgggaagctatagaaatggacagaaagaatcgaacgtacacgttactggaggacagt
gacagtgatggagaagctgtgaaagagaagcagaaaggcaaaaagaaaagcaaagacaaa
gacagaggaaacaagagaaaacacatcagacagaaaaaagagagtgagtcttcaagtgag
gatgaggcaccgaaaagagagaacaggaatatcaagaaggacgatgaagaagaggaggag
tgggagaaggaagagagggagcggcagcaggacatcgaagagagggatgcgtttgctgaa
agagtgaagcttaaagacaaagagaggacacgcaacatcgcagagaggactgacaaaaag
gcttatgaagaagctcaaaagaggctgaagatggctgaagaaggtcaaaataacatgttg
ccggagctgagaaagcgctctcgttgggaatacctgaagaagagagaggcagagaagctg
gaggacctggacgctgagatcagagatgacgagtatctgttctctacagacgagctgact
gagcgggagaaaaaagagttagaatacaaacgcaccctccgtgacttggccaaagattac
aaaaaggctggagcaaaagagcaggaggagaggaagaacagatactacatgccagaggag
aagaggagcaaggaggtgccacagagagacctggagctagaggagactcccatggagctg
ggaggagagcagggccgctgggaggaggagaggctgaagacggcttccctcaggtttggg
gctaagaaggagcgagagcaggggatgaagcaggagcaggataagtaccagctggtcctg
gaggaggacgaaatgatcgactttgtcagcactgccatgaccatgaaggggactcggtca
gaaaaggatcaggaggctccagctctgtcacaggcagagctgaacaaacagtccatgcag
gaggttcgacgcagcctgccaatctacccatacagagaggacctgctggctgccatccat
gagcaccagatcctggtcattgagggggagactgggtctgggaagaccactcagatccct
cagtaccttcttgaagatgggtacactaaaggaggcatgaagatcggatgcacccagcct
cgaagagtggcagccatgtcggtggcagccagagtggctcaggaaatgagcgtcaagctt
ggaaacgaggtggggtacagcattcgttttgaggactgcacatcagagagaacagtgctc
aagtacatgacggacggcatgctgctgagagagtttctcactgagcctgatctggccagc
tacagtgtgatcatcatagatgaggcccacgagcgcacactccacacagacatcctcttc
ggtctgattaaagacatcgccaggttcagacaggacctgaaggtgctggtagccagcgcc
acactggacaccgagcgcttctcctgcttctttgatgatgcaccagtcttcaggatccct
ggcaggaggttccctgtagatatcttctacactaaagctcctgaggcggactacctggag
gcctgcgtggtgtcagtgctacagatccacgtcactcaggctcctggagacgttctggtg
ttcctcactggacaggaggagatcgaagcttgctgtgagatgctccaggagagatgcagg
cggctcggctctaagatagcagagctgctggtgcttcccatctacgccaacctgccatca
gacatgcaggccaagatcttcaacccgactcctcctggagcccggaaggtggttgttgct
acaaacattgcagaaacctcgctgaccatagacggcatcatctacgtcatcgacccgggc
ttctgcaaacagaagagttacaatgctcgcaccggcatggagtcactcatcgtcacgccc
tgctcacgggcttcagccaaccagagggctggccgtgcaggcagagtggctgctgggaaa
tgcttcaggctgtacacagcctgggccttcaagcatgagatggaggaaacgactgtgcct
gagatccaaaggaccaacctgggaaatgtagtcctgctgctaaagagtctaggaattaat
gacctcatccactttgacttcatggacccgcctccacatgagactctggtcttagcgttg
gagcagctctacgctttaggagcactcaatcacctcggagaactcacaaagctgggtcgc
aggatggctgagctccccgtggaccccatgctgagcaagatgatcctggcttctgagcag
tacaagtgttcagaggaggttctgacgatagctgccatgctgtctgtaaacaactccatc
ttctaccggcccaaagacaaggtggtgcatgccgacaacgccagaatgaactttgtggtt
ccaggtggagaccacatggtgctgctcaacgtctacactcagtgggtggagagcggttac
tccactcagtggtgctacgagaacttcatccagttccgctccatgagacgagcccgggac
gttcgggaccagctggagggtctgatggatcgtatcgaggtggaggtggtcagctccaag
gatgacagcttaccaatacgcaaggcggtgacggcaggatatttctaccacacggcgcgg
ctgagcaaaggcggttacaagacggtgaagcaccagcagacggtgtacgtccatccaaac
agctctctgttcgaggagcagcctcgctggctcatctaccacgagctcgtcttcaccacg
aaggagttcatgagacaggtgatcgagatcgatagcggctggttactggaagtggccccc
cactactacaagagcaaagagctggaggacagcagcagcaagaagatgccccgcaagcag
gggaagacgaaagaggagctggggtga
DBGET
integrated database retrieval system
