Halichoeres trimaculatus (threespot wrasse): 141800678
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Entry
141800678 CDS
T11192
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htc03000
]
141800678 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
htc03310
]
141800678 (rorc)
Transcription factors [BR:
htc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
141800678 (rorc)
Nuclear receptors [BR:
htc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
141800678 (rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
141800678
NCBI-ProteinID:
XP_074539477
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MEYEEHDVLQTDIPFKTGGAVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFFR
RSQLPTVSYSCSRQSNCQIDRASRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLIA
EVERHRQQQQQQQLQGDTQSVLFSTTKLRQELSILQPMAYPFGGDAELLSYTADVHPYLV
CSPNEAQATAMMYRGSSVSPVSRAQGRGDTSGHPDLRGFNSRQSSSDLMAIHPYSPLEDQ
YSLYPHSLRNIDELCASIVRAHRETSQYRVEELQTLRWKLFSREEIQSYQNKSVDEMWQH
CAIRLTDAVQFVVEFAKHIPGFRMLSQNDQIALLKTGSMEVVLVRMSRSFNTENNTVFFD
GKFAGTEVFKSLACGDLITAVFDFAHGMCALKLTEQQIALFSALVLINADRPCLEDKGRV
QRVQKSVELGLTHILHRDNQENLMHKLYQRMAVLRSLCSLHMEKLRWFSLRYPLTAHTLF
PPLYKELFASEHELLQGTSH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaggagcatgacgtgcttcaaaccgacatccccttcaaaacaggaggagcc
gtgtccaagaagactcatttgacccagattgaagttatcccctgcaagatctgtggggat
aagtcctctggagtgcattatggagtcatcacctgtgagggctgcaagggatttttccgg
cgtagtcagcttcccactgtatcttactcctgctcaaggcagagcaactgtcagattgac
cgggccagtcgcaaccgctgccaacactgccgtctgcagaagtgcttggcacaaggcatg
agcagagatgcggtgaagtttggtcggatgtcaaagcgtcagcgggactctctgattgct
gaagtggagcggcaccgacagcagcagcaacagcagcagcttcagggagacacccagtcc
gtactgttctccaccaccaagctccgccaagaactgtccatccttcagcccatggcttat
ccctttggcggggatgcagagcttctgtcctataccgctgatgttcacccttacctggtg
tgctccccaaatgaggcgcaggcgacagcaatgatgtaccgaggctcctctgtctctcca
gtatcaagagcccaggggagaggggacaccagtggacaccccgacttaagaggatttaac
tccagacagtcgtcgagtgatctgatggccatccatccctacagccctctggaggaccag
tacagcctctatcctcactctctgagaaacatcgatgagctgtgtgccagcattgtgcgt
gcccacagagagaccagccagtacagagtggaggagctgcagactctcagatggaagctg
ttcagcagggaggagatccagtcctaccagaacaaatcggtggatgagatgtggcagcac
tgtgctatacggctaacagatgccgtgcagtttgtggtggagtttgcgaaacacatccca
ggtttccgaatgctgagccagaacgatcagatagctctcctgaagactggttccatggag
gtggttctggttaggatgagtcgctccttcaacacagagaacaacaccgtcttctttgat
gggaaatttgctggcactgaagtctttaagtccttggcttgtggagatttaatcacagca
gtgtttgacttcgctcatggcatgtgtgctctgaaactcactgagcagcagatcgctctt
ttcagtgctctggtgctgatcaacgcagaccgcccctgtctcgaggacaaaggcagggtt
cagcgagtgcagaaaagtgtggaattaggactcacacacatccttcaccgtgacaaccaa
gaaaatctaatgcacaagctgtaccagaggatggcggtgttgcgttcactgtgcagcctg
cacatggagaagctgcgctggttcagtctgcggtacccgctcactgctcacactctgttt
cctcctctctacaaagagctgtttgcctctgagcatgagctcctgcaagggaccagtcac
tga
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