Halichoeres trimaculatus (threespot wrasse): 141800743
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Entry
141800743 CDS
T11192
Symbol
pdgfba
Name
(RefSeq) platelet-derived growth factor beta polypeptide a
KO
K17386
platelet-derived growth factor subunit B
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04010
MAPK signaling pathway
htc04020
Calcium signaling pathway
htc04510
Focal adhesion
htc04518
Integrin signaling
htc04540
Gap junction
htc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141800743 (pdgfba)
04020 Calcium signaling pathway
141800743 (pdgfba)
09133 Signaling molecules and interaction
04518 Integrin signaling
141800743 (pdgfba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141800743 (pdgfba)
04540 Gap junction
141800743 (pdgfba)
09142 Cell motility
04810 Regulation of actin cytoskeleton
141800743 (pdgfba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
htc04052
]
141800743 (pdgfba)
00536 Glycosaminoglycan binding proteins [BR:
htc00536
]
141800743 (pdgfba)
Cytokines and neuropeptides [BR:
htc04052
]
Cytokines
Growth factors (RTK binding)
141800743 (pdgfba)
Glycosaminoglycan binding proteins [BR:
htc00536
]
Heparan sulfate / Heparin
Growth factors/receptors
141800743 (pdgfba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
141800743
NCBI-ProteinID:
XP_074539604
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MRSWVLLLLLAALSAARLRLSSAKGDPLPTSLVDLVRNSPISSVDDLKLLLQQETNAIEE
EEDEHDIPLNRTHGRYTRSLVEAPMAQQAACKVRTEVMEVTRSMLDRRNANFILWPPCVE
VQRCSGCCNTRLLQCVPTATSSRYLQVYKIQYINRKPHYEKAIISVEDHVNCRCQSPSSP
SSSSSVPMPRSSILSNPNPPPLQQPPQSSHVPRLVHPSPPKTQTSKADLHRHDDLKYNQQ
HYQPDERDSVARQWQQGSYTQLVHWTQPRMHQTPTHAQSGVHQPNVGVHAPVSSWPSEAR
AEHSFMGSTQPVGHGSGYDGSKEESGVRVANSGGEVHHPDHMQRQQQLLQHQQRQQQLQQ
QYQYPQQPHYPTQYNPSAPQDQDLRTQYRLNAPQSDSASPPASPTRLPTLEPDLTPLLTT
KQKDSVTSQKTTAVTNNKQTETATASQKVASEREESGSANSGAGAELTSQGKEKDSKVTS
GYGHLTEEERRRLTLETIQQELDRETHLHPHHPQQRPKPTTFKTALSTSSPVLSSARQTP
FRPASPRRRRRKHRKRISKAAIRAMIM
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctgggtcctgctgctgctgctggctgcgctctcagcggcccgtctgcggctc
agcagcgctaagggtgatcctctacccacgtcgctggtcgacctggtgaggaactctccc
atctcctccgtggatgacctgaagcttctcctgcagcaggagactaatgcaatagaagag
gaagaagacgagcatgatatacccttaaaccgcacccacgggcgatacacaaggagtctt
gtggaggcgccgatggctcagcaggcggcgtgtaaagttcggacagaggtgatggaggtt
accaggtccatgctagatcgccgcaatgccaactttatattatggccaccctgtgtggag
gtgcagcgttgttctggatgctgtaacaccaggctgctgcaatgtgtccccactgccacc
tccagtagataccttcaggtgtacaagatccagtacataaacaggaaaccccactatgag
aaggccatcatctcagtggaggatcatgtcaactgcaggtgccaatcaccctcatccccc
tcatcttcctcctctgttcccatgcctcgatcttctattctgagcaaccccaacccacct
ccactgcagcagcctccacagtcctctcacgtcccgcggctggtccaccctagtccacca
aagactcagacatccaaagcagacctccatcgacatgacgacctgaagtacaaccagcag
cactaccagcctgatgaacgggattcagtggcaagacagtggcagcagggcagctacacc
cagttagtgcactggacacaacccaggatgcaccagactccaacacatgcacagtcaggg
gtgcatcaacccaatgttggggtacatgcaccggtcagcagctggccatctgaagccagg
gcagagcatagcttcatgggaagtacacaacctgtgggacatgggagcgggtatgatgga
agcaaggaggaaagtggtgtacgtgtagcaaacagtggaggagaagtgcatcatccagat
cacatgcaaaggcagcaacagttgttgcagcatcagcaaagacagcagcagcttcagcaa
cagtaccagtatcctcagcagccacattatccaacgcagtacaaccccagtgcaccacag
gaccaagatctgaggacacaatatcgccttaatgctcctcaatcagacagcgcctctcca
cctgccagcccaacaagactgcccaccttagagccagacctcacccctcttctgaccacc
aaacagaaagattcagtgaccagccaaaaaactacggcggtcacaaataacaaacagact
gagactgcaacagccagtcagaaagtagccagtgaaagagaggagagtggatcagctaat
agtggggctggagcagagctgaccagtcaggggaaggaaaaagactcaaaagtgaccagt
gggtatggtcatttaacagaggaggagaggagacggttgactctggagacaatacaacag
gaactggatcgagagacacatcttcatccacatcatcctcagcaaagaccaaaaccaaca
acatttaaaacagctctctccacatcatctcctgtcttgtcatcagctcgccaaacccca
tttagacctgcctcccctcgtcgccgcaggaggaaacatcgcaaacgcatcagtaaagca
gccatcagagccatgatcatgtag
DBGET
integrated database retrieval system
