Halichoeres trimaculatus (threespot wrasse): 141801360
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Entry
141801360 CDS
T11192
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6 isoform X1
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018
RNA degradation
htc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141801360 (lsm6)
09123 Folding, sorting and degradation
03018 RNA degradation
141801360 (lsm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141801360 (lsm6)
03041 Spliceosome [BR:
htc03041
]
141801360 (lsm6)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141801360 (lsm6)
mRNA degradation factors
5'-3' decay
Lsm complex
141801360 (lsm6)
Spliceosome [BR:
htc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
141801360 (lsm6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
141801360
NCBI-ProteinID:
XP_074540477
LinkDB
All DBs
Position
Unknown
AA seq
97 aa
AA seq
DB search
MRVVVCFIIRIISKQNKMSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNI
AIEQTEEYVNGQLKNKYGDAFLRGNNVLYISTQKRKV
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgtggtttgcttcataatcagaattatatcaaaacaaaacaagatgagtcta
agaaagcagacaccgagtgactttctgaagcagataatcggaaggccagtggtcgtcaaa
ctgaactcaggcgtcgattaccgaggtgtcctggcctgcctggatggttacatgaacatc
gccatagagcagactgaagagtatgtcaatggccagctgaaaaacaagtacggagatgcg
tttcttcgaggaaacaatgttctgtacatcagcacccagaagaggaaagtgtga
DBGET
integrated database retrieval system
