Halichoeres trimaculatus (threespot wrasse): 141802214
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Entry
141802214 CDS
T11192
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141802214 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htc03000
]
141802214 (arid1b)
03021 Transcription machinery [BR:
htc03021
]
141802214 (arid1b)
03036 Chromosome and associated proteins [BR:
htc03036
]
141802214 (arid1b)
Transcription factors [BR:
htc03000
]
Eukaryotic type
Helix-turn-helix
ARID
141802214 (arid1b)
Transcription machinery [BR:
htc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141802214 (arid1b)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
141802214 (arid1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
141802214
NCBI-ProteinID:
XP_074541825
LinkDB
All DBs
Position
Unknown
AA seq
1973 aa
AA seq
DB search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NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccagcctgggatcatccaccaacatctccaccaccgacaacaaccgtcctctg
agtctgagtgggaccagctctgagtttaatcattattatgggaatggaagaggagggcct
tgctttgatcaacatggcggacaacaaagcgcagggactagggtaacagcggctcgatca
gtacacaacaccatggatcaggttcagaactcccacgaaggctataacaacaacagcccg
tataaccactacccgaactaccgacccggctatggtagcgggggctacggaggcatgatg
agtccctcccgacagggaaacaacctgacgggcccgggcagcggcagcaaagcggctatg
actgcaaccagctccccggctggaggcggaggtggcggcggaggatatcagcggttcccc
gcgcagagtcagcagcaaatgcacccgtccggagccacaccgacattaaatcagttactt
acatccccgagcactatgatgcgaggctatggaagtggatatcctgattttaataatccg
actgcacagcagcagccgaacatggggatggctaaagacatgggatcccagttcggctcg
gctgctcacggctggggaggacaacaaagaagtcacccgagtatgagcccggggaatacc
gcacagggaagcgggagatcacaggtggcgccgatggacccaatggcgatgaaacgctca
caactctatggtatgagcagcaacccatactcccagcagcagcagcagggggcgccgtac
tccggacagccttacggagccccgtcccctcacagataccctatggggatgtcgggcaga
gggcagatggggatgggagggatgcagtaccctcagcagcagattggctctcagtatggt
cagcagcagagtgtgagcggttactgtcagccaggtcagccgccttacttcagcccaccg
cagcagcagccggccgcccccagccagccaccatacatgcagccccgcccacttccccaa
caggaggtcccacaggaggcgtacggtgggcggggccaggccgctgcaatgactccgggg
aaaccgaaccatgaggagatgaatttgagccagcaggagcgtccgtccagcctgccggat
ctgtccggctccatcgatgacctgcccactggcacagaggcagcagtgagttcaggacca
tctggatctggcagcgctcagggcgaccaggggacgccagcccgctcccctttctccccc
cacgtctcacctcgactccccccgccagctcgtactgggccctccccatctccctcgccg
tcccctgctgggtccagcagccagtcacgatctggacctctgtcacccgccaccagtgga
ccaggctctcagctgacccctcaggtccctcgtcctggatcagatgttggtcctcatccc
tcccagtctgccatgactcaagacagaggtttccctccctccatgcagcgtagcactcaa
gggcctcagtttgggccccagcaatcagcacccatgtcccctcactccaccccagggggg
cccatgcaccagggctcctaccagcagggcagttcatacggccagtatggtcccccaggt
aactttccccggcccccccactatggcggggcccccagtgccaactacagcacccctggt
ccgggttccagccttgccaacagcctgggtttgaacgccagcagtcccatgcatggtcag
ggtccgtccacaccagcaggtcgtggtccgggaccaggaccagggggtcggccatatcct
gctggagggggcactatggctcccacctcccctgggatgccacagcctgctgggcagggc
atggggcctccggggccaaacgctggtcgtaaactacctgaggtgggtcctaacgcgggg
ccgagtgccaactcatcatcatcatccttgacgtctgcctcagccgctccaggaaggcag
ggcagctacatgggaatgccaccaatgggaggaatgggccctggaggtccgtacagccag
caaccaggcagcagctctgggaggatgacaccacagggaccgccccacaacccgccctca
ggtcccatgatgatgtctgcagatgggatgggtgctcatccagatgccaagcagagagtg
gagctgagcaaagacggcatctgtcctgtctctgaaccactcaaacctaaggacgggttc
ctctctcagcctgtgtccaagccccttacgccatccccgatgtcccccagctctgctagt
ctgtcctcctatcacggggaggacagcgacagcattagcagtcctgcctggcccaagaca
tcaacaagccctaagcccagcgtggccaccatgaccaatgagaagataacccggctgtac
gagatgggctcagagccagagaggaggatatgggtggatcggtacctgacctttatggag
gagagggggacgcctgtcccgaacttgcctgctgtggggaagaaacctctggacttgtgc
agactctacctgtgtgtccgggagatcggaggtctggccatggtgaacaagaataaaaaa
tggagggagttgtcgtctctgttgagcatagggacatccagcagctcggccagctctctg
aagaagcagtacatccagtacctgttcgcctacgagtgtaagatggagcgaggggaggag
cccccacctgagggcccagggtccactggagaggccaagaaagctccatctctacaggcc
aagatccagcctccgtccccagccaactcgggctccctgcagggccccaacacacctcag
tccagcagcagctccctcaccgaggcccctggagacctgaagccaccgacccctgcctcc
acaccacacagccagatgggcccccagcagggaaacaggaatatgggtggggtgagcgtc
caggatccgttctctgaagggagtgacccagctttccacaacaagcgaggtccaggacct
ggtggtaccccctaccagcagggaggaggtccaagtgacccctcaatgaggatgcagttt
gacaacaaagatccctttggaggagcgaggaaaggtccagggcttggtggtgaagccttt
ggccctggtcagatgcccagtggtgccatgcaggacatgtacccccgtgggccaccctca
ggacccctgacagggatgggtcccagaccccagtatccttacggccaaggctacgagagg
aggtcagatcatgtgatgggcccagaaggaggcctggcgccccctggaggtcagaacagc
ttgggtccatctggaaacgaggccggcatgttccccgccaacagatatcccccccagaga
catggacacgatggtttcgggcagcagtatcctcacggcatggcctacagttcccatcag
cccctgtaccctcagcagcagggctacaagcgtccgatggagtcgctctaccctccggca
aagcgtcatgaaggagaagcgtttggcgtgcagacgtttggctcccagcagtctgacatg
ttcagcccctacagcagcggaggagggggagggggcttcatgggcccagagcgacggcct
gttcaaggccagtacccatacccttatcccagagaccggcaggggcctccacagcatggc
atgatgggatcaggaccgccatcagtttcaggggggcccagtgaggggccacagggtaac
atgtggcaccccagatcagacatgggatactcttacaaccgccaggggcccccttacccc
ggcatgggtagaggggacgagcaggagggccgggttcaggagaatcagtggccaccgaat
catccaagccgccagccaccttactcctcctcctcttcctcctcgatgccctccagacca
cagtcatcctccttccaagccacaccaactgttcccaaccatgtgacccgctcccttagc
ccctcctccttccctcggcccatggcgggctcgctttcccccaacagcgccccctaccta
ccctccatgaagaaaccaggccaccctggcggtcctccgtcctctcagagcgttcacctc
ctgcacagagacatcagcttccctcctggttctgtagaggccacggcccctaaactgaag
gcacggcgccgactcaccgctaaggatactggaactccagaggcgtggcgagtgatgatg
tcgctgaagtccggcctgatggcggagtgcagctgggctctggacaccattaacatcctg
ctctatgacgacagcaccgtgagctccttcagcctcactcagctgcctggtttcctggag
atcgtggtcgagtattaccgccgctgccttctccagatttttggtatcctggaggagtac
gaggttggggcagagggacagaagaccctactgggggaggagaaggaggtgcaggaggcg
ccatctgcctactctgagtccaaccaatcagagacgctgaagaggtcagaggaggaagag
ccggtgcttttactcacagctcctcttttagatgcagagaaggagaaaaaggagaaccct
gtggtcaaagaagaggaagtgaaagaagagctccgccccccacaggcgagcaagcacgac
aggctccccatcaaactggaggacaccggggaggagtgggaggaggtggaggcgcgctgg
gccgaactcagccggccaaacggtttcatcagcgggctcctccactggaaggctggtggg
ggagacacaacggctcacatcctgacgggagcagagggggaggggggcggagagaagggg
aggagatggggggaagaggaggctctgggaggtgaggaagaggagaagctaccaggtggt
gaggagacaccgcctgacacacaagaaggctctgaggtcagaggtcagactccaccggct
aggagccccctcagtcagctggaagacgagcctcgctgctgggacgaggcgccgctctcc
actgccaaatcctggcaggacgctttgtccaaacgctgcatctgcatctccaatatcgtg
cgtggcctctcctttgtccctggaaacgacgccgagatgtcccggcacccaggcctggtt
ctgatcctgggccggctggttctgctgcaccatcaccacccccacaggaaacggactctg
ccaagctaccagcgtgaggaggggcaagggcgggcctgcagccgggacgagtggtggtgg
gactgcctggcgactctgcgggaaaacacgcttgtgacgctcgctaacatggcaggccag
ctggatctgtcaggttaccccgagagcatcatcctgccggttctggatggactgctgcac
tggatggtctgcccgtccgctgaggcccaggacccattcagctcagcgatcggcgttggc
tcgctgtcgccccagcgactggctctagagtgtctgtgcaagctgagtatccaggacagt
aacgtggacctgctgctcgccacacctcccttcacccgccagcagaaactctacgccaca
ctggtgcgtcttgtgggggagcggaagagccaggtgtgtcgggagatggcggtggctgtc
ctgtctaacctggctcaaggggacgccacggcggcgcgagctgtcgctttacagaaaggc
agtgtgggaactctgatcggcttcctagaggacagcgtggcaatggctcagtaccagcag
agctcacacagcatgttgcatgccactgcgcctgagccaccaagcatcaacatgatgtgc
cgtgctgctaaggctctgctcgccatggcgaaggttgaggagaaccggacggagtttgtt
ctgtacgagagccggctgctggacatctcgctgtcagcggcgcttaactcctcggtggca
gccatcatgtgtgaagtactctttaaaattggccgctcgtga
DBGET
integrated database retrieval system
