Halichoeres trimaculatus (threespot wrasse): 141802938
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Entry
141802938 CDS
T11192
Symbol
smarca4b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141802938 (smarca4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htc03021
]
141802938 (smarca4b)
03036 Chromosome and associated proteins [BR:
htc03036
]
141802938 (smarca4b)
Transcription machinery [BR:
htc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141802938 (smarca4b)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
141802938 (smarca4b)
Chromatin remodeling factors
BAF complex
141802938 (smarca4b)
PBAF complex
141802938 (smarca4b)
GBAF(ncBAF) complex
141802938 (smarca4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
141802938
NCBI-ProteinID:
XP_074542867
LinkDB
All DBs
Position
Unknown
AA seq
1672 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSSHSMMGPSPGPPPSGHPQPGPS
GYGQDSMHPLHKPMESMHEKSLTEESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSNGPPSGPLMPSSSSSSSSGGPGSASTALEVPSGDQHTLGPNNRPGPP
GSSGPGPSPGPSLGPSVPSLGSGIESGGPTVPGGPGGPTPFNQNQLHQLRAQIMAYKMLA
RGQPLPDHLQMAVQGKRPMPGMQQQPIPSLVPLGGGGPGGGPAGPGPGPGPMGSGYSRAH
GMMGPNMPPPGPSGTPAGMQGPNPNGPPKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSP
APPSVPPAASPVMPPQTQSPGQPAQPTPMMPYHAKHNRITPIQKPCGLDPVEILQEREYR
LQARITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETA
LDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSI
TGKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYL
LQQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAENQAPAMGPDGEPLDETSQM
SDLPVKVIHVDSGNILTGLDAPKAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEE
EPQPSSALVDEKKKITDPDCEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYSVAH
AVTEKVEKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL
MEHKRLNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKFNVL
LTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQN
KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFL
LRRLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLM
NTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATN
HKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPGSEYFIFLLST
RAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA
AAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRMNEEDEVPD
DETVNQMIARSEEEFDQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLT
CEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEVEEEVRHKKTTRKRKRDRD
LDLPGPSSSLGGRGRGDKDDDGKRQRKRGRPPAEKLSPNPPALTKKMRKIVDAVIKYKDS
TSGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRGHRYRSLGDLERDVMLLFQN
AQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEDSEEEEEELDEGSESESRSVKV
KIRLGRKDKGGDRGKGRSRRMGRTRAKPVVSDDDSEDEQEEERSPSATDEES
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaccagacccccccatgggaggcacacctcgtccaggtccttcccctggtcct
ggtccctctccgggggcgatgcttggccccagccctgggccctctccaggctcttctcac
agcatgatgggccccagccctggccctcccccctctggacacccacagcctggaccctct
ggttatggccaggacagcatgcatcctctgcacaaacccatggagagcatgcatgagaag
agcctgactgaggaaagccgcttcagtcagatgaagggactgtctatgagacagggtggg
cacagtgggatgggccccccacccagtcctctagaccagcactcacaaggttaccactct
cctttaggtggctctgaccactccagccccgtcccttcaaacggccctccctccggtccc
ctcatgccttcctcctcctcctcatcctcctctggtggtcccggctctgcctccacagct
ttagaagtccccagtggagaccagcacactcttggcccaaataacaggcccggccctcca
ggcagctctggccccggccccagtcctggccccagtcttggccccagtgtccccagtctt
ggatctgggattgaatcagggggcccgactgttcctggtggccccggtggccctactccc
ttcaaccagaaccagctacaccagctcagagctcagatcatggcgtataaaatgttagcg
cggggtcagcctctgccggatcacctccagatggcagtccaggggaagaggccgatgcct
gggatgcagcagcagccgatccccagcctggttcctttaggtggaggtgggccgggtggt
ggaccagcaggacctgggccagggcctggaccaatgggctcaggctacagtcgagctcat
ggaatgatgggtcccaacatgccccctccaggaccatcaggtacaccagctgggatgcaa
ggtccaaacccaaatggacctcccaagtcctggcctgaaggtcccatggtgaacgcagca
gccccctccaacgctccccaaaagctgatcccccctcagcccactggacggccctctcca
gcccctccatcagtcccgcctgctgcctccccagtgatgcctccacagactcagtccccg
ggccagccggcacagcctactcccatgatgccttatcacgccaagcacaaccggatcact
cccattcagaaaccctgcggcctggatccagtggagatcctgcaggaaagggagtacagg
ttacaggctcgtataactcatcgtattgctgaactggagaacctgccaggctctctggct
ggtgatttacgtaccaaagctaccatagagctcaaagccctgcgactgctcaacttccag
agacagctgcgtcaagaagtggtcgtgtgtatgcgtcgtgacacagcactagagaccgcc
cttgatgccaaagcctacaagcgaagcaagcgtcagtccttgcgagaggctcgcatcaca
gagaaactggagaaacagcagaaaatcgagcaggagcggaaacgccggcagaaacatcag
gagtacctcaacagcatcctgcagcacgccaaagacttcaaagagtaccaccgctccatc
accggcaaaatgcagaaactgaccaaagctgtggccacgtatcacgccaacactgagcgc
gagcagaagaaagagaatgagcgcatcgagaaagagaggatgaggaggctgatggccgag
gatgaggagggctatcgtaaactgatcgaccagaagaaggataagcgtctggcgtacctg
ttacagcaaacagacgagtatgtggcaaacctcactgagctggtccgagctcacaaagca
gcacaggcgctcaaggagaaaaagaagaagaagaagaaaaagaagaagttagaaaatgct
gagaatcaggctccagctatgggcccagacggagagccactggatgagacgagtcaaatg
agtgacctgcctgtgaaggtcattcacgtggacagtgggaacatcctgacgggactggac
gctcctaaagcgggtcagctggagacctggctggagatgaatcctggttatgaagtcgct
ccccgctcggacagtgaagacagcgaggaagaggaggaggaagaagaggaggaagaggag
gagcctcagccgtcgtctgctctggtggacgagaagaagaagataacagaccctgactgt
gaggacgtgtcagaagtggatgtccgacacatcatcgaaaacgccaaacaagatgtggat
gacgaatacagtggtgcagcgttcgcccgtggccttcagtcgtattattctgtggctcac
gctgtcacagagaaggtggagaaacagtccagtttgttgataaatggacaactcaaacag
tatcagattaaaggtctggagtggctggtttctctctacaacaacaacctgaacgggatc
ctggcggatgagatgggtctgggaaaaaccatccagacgattgccctcatcacgtacctc
atggagcacaaacgtctcaatggaccctacctcatcattgtaccgctctcgactctgtct
aactgggtgtatgagtttgataagtgggcacccacggtcgtgaaagtgtcctataagggg
tctcctgctgccagaagagcctttgtcccccagctgcgcagtggaaagtttaatgtttta
ctcactacttatgagtacatcatcaaagataaacaagtgctggccaagatccgctggaag
tacatgatcgtggacgagggccaccgtatgaagaaccatcactgtaagctcacccaggtc
ttgaacacccactacctggcaccacggcgggtccttctgacaggaacaccgctgcagaac
aaactgcctgagctctgggcgctgctaaacttcctcctgcccaccatcttcaagagctgc
agcaccttcgagcagtggttcaacgctcctttcgccatgactggagagaaggtggactta
aacgaggaggagaccattttgattatccggcgtctccataaagtgcttcggcccttcctg
ttgcgtagattgaagaaggaagtggaggcacagcttccagagaaggtggaatatgtcatc
aagtgtgacatgtcatctcttcagagagtgctgtacagacacatgcaggctaaaggcgtc
ctgctcactgatggatcagagaaagacaagaagggtaaaggaggcacaaagacgctgatg
aacaccatcatgcagctgaggaagatctgcaaccacccttatatgttccaacaaatagag
gagtcattctctgaacatttaggattctctggtgggattgttcaaggtccagacctgtac
cgggcgtcaggaaagtttgaggtgttggatcgaatccttcccaagctgagagccacaaac
cacaaagtgctgctcttctgtcagatgacatctctcatgaccatcatggaggattacttt
gcttatcgcaacttcaagtatctgcgtctggatggcactacgaaggctgaggacagagga
atgttactgaagacgttcaacgacccagggtctgagtattttatcttcctcctgagcacg
agagctggaggcctcggcctcaacctgcagtccgctgacactgtagttatatttgactct
gactggaatccccatcaggacctgcaagctcaggaccgagctcatcgtatcggtcagcag
aacgaggtgcgcgtgcttcgtttgtgcaccgtcaacagcgtggaggagaaaattttggct
gctgctaagtacaaactgaatgttgaccagaaggtcatccaggccggcatgttcgatcaa
aagtcctccagccatgagcgcagggccttcctgcaggccatcctggagcatgaggagcaa
gacgaggtctggggtcaggaagtgtgtctacgcatgaatgaggaggacgaggtgccagac
gatgagacggtaaaccagatgatcgccaggagcgaggaggagtttgatcagtttatgcgt
atggacctggaccgacgcagagaggaggcccgaaacccaaggagaaaacctcgtctgatg
gaagaggatgagctgcccacctggatcatgaaggatgacgctgaggttgaacgtttgacc
tgcgaggaggaggaggagaaaatgtttggacgaggatcccggcagagaaaagaggttgac
tacagcgattccctgacagagaaacagtggctcaaggcaatagaggagggcacgctggag
gaggtagaggaggaggtgcgccacaaaaagacgacccgtaagaggaagcgggaccgtgac
ctggaccttcctggtccttcctcttccctgggaggtcgaggacgaggggacaaagatgat
gacgggaaaaggcagaggaagaggggacggccgcctgctgagaagctttctcccaacccc
ccagccctcacaaagaagatgaggaagatagtggatgctgtcataaagtacaaagacagc
accagtgggcgacagctgagcgaggtcttcatccagctgccgtctcgaaaggagctgcca
gagtactacgagctgatccgcaagcctgtggacttcaggaagatcaaggagagaatccgg
gggcatcgctaccgcagtctgggtgacctggagagagacgtcatgctgctcttccaaaac
gctcagacctttaacctggaggggtcactgatttatgaagactccatcgttctccagtcg
gtgtttacaagtttgaggcagaagattgaaaaggaggaggaaagtgagggggaggacagt
gaggaggaggaagaggagctggatgaaggatcagagtctgagtctcgctcagttaaagtt
aagattcgtctgggaaggaaggataaaggaggggatcgagggaaaggacgcagcagacga
atgggacgaaccagagccaaacctgtggtcagtgatgacgactcggaggacgagcaggaa
gaggagcgttcccccagtgccacagacgaggagtcctga
DBGET
integrated database retrieval system
