KEGG   Halichoeres trimaculatus (threespot wrasse): 141802960
Entry
141802960         CDS       T11192                                 
Symbol
col1a2
Name
(RefSeq) collagen alpha-2(I) chain
  KO
K06236  collagen type I alpha
Organism
htc  Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04510  Focal adhesion
htc04512  ECM-receptor interaction
htc04518  Integrin signaling
htc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:htc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    141802960 (col1a2)
   04518 Integrin signaling
    141802960 (col1a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141802960 (col1a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    141802960 (col1a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:htc00536]
    141802960 (col1a2)
Glycosaminoglycan binding proteins [BR:htc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   141802960 (col1a2)
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 141802960
NCBI-ProteinID: XP_074542893
LinkDB
Position
Unknown
AA seq 1352 aa
MLSFVDTRILLLLAVTSLLASCQSGPRGDKGPRGDRGPQGPNGKDGKPGLPGPPGPPGPP
GLGGNFAAQYDGAKAPDPGPGPMGMMGARGPPGPPGPPGPQGHTGHPGEPGEPGQTGPVG
PRGPPGPPGKSGDDGNNGRPGKPGDRGAPGPQGARGFPGTPGLPGMKGHRGYTGLDGRKG
EPGAAGAKGEPGAHGAAGSPGLAGARGMPGERGRAGPAGPAGARGADGNVGPAGPAGPLG
AAGPPGFPGGPGPKGELGPAGPSGPAGPQGARGEPGPNGAVGPVGPPGNPGANGLNGAKG
AAGTPGVAGAPGFPGPRGGPGPQGPQGAAGQRGLSGDPGAQGIKGDGGPKGEPGNSGPSG
PPGPQGEEGKRGPSGELGATGPTGNRGARGAPGSRGMPGSEGRTGPIGMPGARGASGAAG
PRGLPGDAGRAGEPGPAGLRGLPGSPGSSGPPGKEGPAGPSGQDGRGGPPGPTGPRGQPG
NIGFPGPKGPSGEPGKPGDKGSAGPTGLRGPPGPDGNNGATGPAGPAGGSGEKGEQGPAG
APGFQGLPGPAGAAGEAGKAGDRGIPGDQGASGPAGAKGERGNPGAAGATGPQGSMGPRG
PAGAPGPDGGKGEPGPAGAAGAAGHQGPGGMPGERGAAGPPGGKGEKGEAGHRGPDGNAG
RDGSRGLPGPAGPPGPTGANGDKGESGAFGPAGPAGPRGPSGERGEVGPAGAPGFAGPPG
ADGQPGAKGERGPGGAKGEVGPGGPAGPAGQSGPPGPAGAAGPSGARGDTGPSGLTGFPG
AAGRVGAAGPAGIVGPPGPAGPAGKDGPRGARGDSGPAGPPGEQGMVGPPGPSGEKGPSG
ESGPPGPAGAPGTSGPLGLQGFVGLPGARGDRGSPGGAGGVGEPGRVGPAGPPGARGPPG
NIGLPGMTGPQGEAGREGNPGNDGPPGRPGIAGFKGDRGEPGPAGAMGLSGAPGPAGPAG
AAGRPGNRGESGPGGAAGAVGPAGARGAAGPAGPRGEKGGAGDKGERGMKGLRGHPGLQG
MPGPSGPSGDTGPAGANGPAGPRGPAGPAGPAGKDGRAGGHGTIGAPGARGPPGYVGPAG
PPGAPGLPGPPGPSGGGYDVSGGYDEYRADQPALRAKDYEVDATIKSLNTQIENLLTPEG
SRKNPARTCRDIRLSHPEWSSGFYWIDPNQGCINDAIKVFCDFDTRETCISAQPGSIPQR
NWYRSTESKKHVWFGETINSGNEFAYNDETLSPQSMATQLAFMRLLSNHASQNITYHCKN
SIAYMDDESGTLKKAVVLQGSNDVELRAEGNSRFTYSVLEDGCTRHTGEWGKTVIKFNTN
KPTRLPILDIAPMDIGGPNQEFGLDIGPVCFK
NT seq 4059 nt   +upstreamnt  +downstreamnt
atgctcagctttgtggatacccggattctgttgctgcttgcagtaacttcattactagca
tcatgtcaatctggcccccgaggagacaaaggacctcgaggtgacaggggtcctcagggc
ccaaatggaaaagatggcaaacccggactccctggaccccctggcccccctggtccccct
ggactcggaggaaactttgctgctcagtatgatggtgcaaaagctcccgatcccggccct
ggacccatgggtatgatgggtgctagaggccctcctggaccccctggacctcctggacct
cagggacacaccggacaccctggtgagcccggagagcctggacagactggccctgttggt
cctcgtggcccccctggaccccctggcaaatctggtgatgatggtaacaatggcagacct
ggtaagcctggagacagaggtgcccctggcccacagggtgctcgtggattccctggaacc
cctggacttccaggaatgaagggacacagaggttacactggtctggatggacgcaaggga
gagcctggtgctgctggagctaagggtgagcccggtgcacatggagctgctggaagtccc
ggacttgctggtgctcgtggtatgcctggtgagagaggtcgtgctggccctgctggcccc
gctggtgctcgtggtgctgatggcaatgttggtcccgctggccctgctggtcccctcggt
gctgctggtcccccaggtttccccggtggtcccggccccaagggagagcttggacctgct
ggaccttctggccctgctggacctcagggagctagaggagagcctggtcccaatggcgct
gtcggccccgttggtcctcctggtaaccctggtgctaacggcctgaatggagccaaggga
gctgctggtactcctggtgttgctggagctcctggcttccccggaccaagaggaggacct
ggaccccagggtcctcagggtgctgctggacagagaggtctttctggagatcctggtgct
cagggtatcaagggagacggtggccccaaaggagagcctggtaattctggaccttctgga
ccccccggacctcagggtgaggagggcaagagaggacccagtggtgagcttggtgccact
ggccccactggcaaccgtggagctagaggtgcccctggtagtcgtggcatgcctggatct
gagggaagaactgggcccattggtatgcctggtgctcgtggtgccagtggtgccgctgga
ccacgtggactccctggagatgctggtcgtgctggtgagcctggacctgctggtctcagg
ggtctcccaggaagccctggaagctctggacctcccggaaaggagggacctgctggtccc
tctggacaagatggccgcggtggacctcctggcccaactggacccagaggccagcctgga
aacatcggcttccctggacccaagggacctagcggtgagcctggcaagcccggagacaag
ggatctgctggccccactggtctgagaggacctcctggacctgatggaaacaatggagcc
actggccctgctggacctgctggtggttctggtgagaagggagagcaaggacctgctgga
gctcctggcttccagggtctgcctggacccgctggagctgctggagaggctggcaaagct
ggagacagaggtatcccaggagaccagggagcttctggacctgctggtgctaagggagag
cgtggaaaccctggtgctgctggagccactggacctcagggatccatgggaccccgtgga
cctgctggagcccccggacctgatggtggaaagggagagcccggtcctgctggtgctgct
ggcgctgccggacatcagggaccaggtggcatgcctggtgagcgcggagctgctggaccc
cctggaggcaagggagagaagggagaggctggacaccgaggacctgacggcaatgctggc
agagatggttcccgtggtctgcctggacctgctggacctcccggacctactggagccaat
ggagataagggtgagagcggtgcctttggacctgccggacctgctggaccccgtggaccc
tctggagagcgtggagaggttggacctgctggagctcctggatttgctggaccccctggc
gctgatggtcagcccggagccaaaggagagcgtggacccggaggagcaaagggagaagtt
ggccctggtggacccgctggacctgctggacagtctggacctcccggtcccgctggtgct
gctggcccctctggcgctcgtggagacaccggcccatctggtctgactggtttccctggt
gctgctggcagagttggtgctgctggtcccgctggtattgttggtccccctggccctgct
ggtcccgctggtaaggatggtcctcgtggtgctcgtggagattctggtcccgctggtcca
cccggagagcaaggaatggttggaccccctggtccatctggagagaagggaccctctgga
gagtctggaccccctggccccgctggtgctcctggaaccagtggacctcttggtcttcag
ggattcgttggtcttcctggtgctagaggagaccgtggttctcctggtggtgctggtggt
gttggtgagcctggcagagttggacctgctggtccccctggagcccgtggtccccctgga
aacatcggcctgcccggtatgaccggacctcagggagaggctggacgtgagggtaaccct
ggtaacgatggaccccctggccgccctggaattgctggattcaagggagaccgtggtgag
cccggacctgctggagctatgggactttctggtgcccctggacccgctggacctgctgga
gctgccggcagacccggaaaccgtggagagagtggccccggaggtgcagctggagccgtt
ggccctgctggagctagaggtgccgctggacctgctggaccccgtggtgagaagggaggt
gctggagacaagggagagagaggcatgaagggtctgcgtggacatcctggtctccaggga
atgcctggaccttctggaccttctggtgacaccggacctgctggagccaacggacctgct
ggacccagaggacccgctggacctgctggacccgctggcaaggacggaagagctggtgga
catggaaccattggtgctcctggtgctcgtggaccccctggatacgttggacccgctggt
cctcctggagctcctggtctgcccggacctcctggcccctccggtggtggatatgatgtc
tctggtggatacgatgagtacagagctgaccagcctgctctgagagccaaggattacgag
gttgatgccaccatcaagtctctcaacacccagatcgagaacctgctcacacctgaggga
tccaggaagaaccctgcccgcacatgccgtgacatcagactcagccaccctgagtggagc
agtggattctactggattgaccccaaccagggctgcatcaacgacgccatcaaggtcttc
tgcgactttgacacccgcgagacctgcatcagcgcccagcctggtagcattcctcagagg
aactggtacagaagcaccgagagcaagaagcacgtctggtttggagagaccatcaacagc
ggtaatgagtttgcctacaacgacgagaccctcagcccccagagcatggctactcagctt
gccttcatgcgcctgctgtccaaccacgccagccagaacatcacctaccactgcaagaac
agcattgcttacatggatgatgagagcggcaccctgaagaaggctgtggtgctccagggc
tccaacgacgtggagctgagggccgagggcaacagccgctttacctactccgtgctggag
gatggctgcactagacacactggtgagtggggcaagacagtgatcaaattcaatacaaat
aaaccaactcgcctgcccatcctcgacattgcacctatggacattggtggacctaatcag
gagtttggtttggacattggcccagtctgtttcaaataa

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