KEGG   Halichoeres trimaculatus (threespot wrasse): 141803199
Entry
141803199         CDS       T11192                                 
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
htc  Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:htc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141803199 (exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:htc03019]
    141803199 (exosc7)
Messenger RNA biogenesis [BR:htc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     141803199 (exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     141803199 (exosc7)
SSDB
Other DBs
NCBI-GeneID: 141803199
NCBI-ProteinID: XP_074543247
LinkDB
Position
Unknown
AA seq 291 aa
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGHTAVLV
GIKAEIGKPRPMVPKEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKNSID
LKSLCISAGEHCWVLYVDVLLLQCDGNLYDAMSIAIKAALFNTKIPKVHISSDDEGGKEI
ELSDDPYDCMRLNIENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTNKGTVTCTR
KVGGGSLDPESIYEMTEAGKRVGKALHAPLMKLLQQEESLGTKRQKVGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcaacagttcaagtcagcgaggcggaaaaagtctacattttacacggtattcgggat
gacttacgagtggatggaagaggctgtgaggactacagacatatggaaatagagactgat
gtggtgtcaaacacggacggctcggctaaagtcacactgggacacacagcggttctagtc
ggaattaaggctgaaattggaaaaccaaggcccatggtgccaaaagaagggtacctggag
ttcttcgttgattgttcagccaatgccactcctgagtttgagggcagaggaggtgaggag
ctggggacagagctgagtaacacactgtacaaagtcttcaacaacaaaaacagcatagac
ctgaaaagcctctgtatcagtgcaggagagcactgctgggtcctttatgtggatgtgctg
cttctgcagtgtgatggaaacctgtatgatgccatgtcaatagctatcaaagcagctctt
ttcaacacaaaaattcccaaggtgcacatatcatctgatgatgaaggaggaaaggaaatt
gagctgtcagatgatccgtatgactgcatgagattaaacatagaaaacgttccttgtatc
gtgacattgtgcaaggtaggtcacaggcacgtagtggacgcaactctgcaagagaaggcc
tgctctgtggcgagcctgattatctctgtcacaaacaaaggcacggtgacctgcacaagg
aaggtgggcggtggcagtctggacccagagagcatctatgaaatgacagaggcaggtaaa
cgagtagggaaagctctccatgctcctctcatgaagctgctgcagcaagaggagagtttg
ggaaccaagagacagaaagtcggcttccttggttaa

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