Halichoeres trimaculatus (threespot wrasse): 141803935
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Entry
141803935 CDS
T11192
Symbol
tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04510
Focal adhesion
htc04512
ECM-receptor interaction
htc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141803935 (tnr)
04518 Integrin signaling
141803935 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141803935 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
htc00536
]
141803935 (tnr)
Glycosaminoglycan binding proteins [BR:
htc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141803935 (tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_Tenascin
Pur_ac_phosph_N
FN3_Tor_3rd
EGF_2
Fn3_VIN3
Fn3_Dep-1_2nd
Interfer-bind
DUF4998
DUF7949
Motif
Other DBs
NCBI-GeneID:
141803935
NCBI-ProteinID:
XP_074544147
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MPLTQQRLRATVPVTGWILALALFLALQGAAHAAPSGDNKLVRTTRVRRQTPGRDQPPSA
SSANETLREQPLVFNHVYNINVPFESLCSVDLDASAPPDPGDGSRGELGSRPSMEGPMDP
VGQSEYTEQTLDADSQMTFTHRINIPKAACGCPASTTIQQLATRVEMLEKEVSMLRVQCG
SGCCGESSAMGRLDFVPGCSGHGSFSFDLCGCICEEGWGGKNCSEPRCPDDCSGQGVCVE
GECVCDRDFGGDNCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGLC
INGTCQCRPGYVGEDCSLVYCANNCSKKGVCKDGFCICQDGFAGDDCNSVAPAMNLKVRG
VTDSTVDLEWEGSVVLTDFLVTYTPSSPGGVQLEIRLPGNVTACSISGLGAGIEYNINVF
AVINNSISVPASITVSTYLSNPDGLVFKSITETSVEVRWQPFYFSFDGWEISFIPKDNDG
GMTAQLPSTITSFVQTGLRPGEEYTVNLVALRDVGRSQPFTATFTTLIDSPTQLIVRDVS
DTVAFVEWTLPKAKIDQIILRYGLVGGEGPRTTFRLQPTLSQYSLQVLRPGSRYDVSVSG
VRKGNESGSISTEFTTALSFFSEIDAPKNLRLVTKTSTTLELEWDNSEAEVEGYQVVYST
LAGDLYDKVIVPRNEGVTTKTTLTDLLPGTEYGIGISAMKGSNQSTPATMNARTGLDVPL
DLTVTASTDNTITLLWGVVQGPIDHYKVTFTSSSGVTNELTVPKDITTTTLTDLEPGTEY
TITVAARRGRQQSTAATIDAFTGIRPVTHLYLSEVTSDSVFVAWSAPAPPADLFILSYSS
ADGTDTSKVTLEGSKTRSLVQGLLPSTAYTISLITIQGDVTSEPILASLITSMDPPKEMT
VSDVTEDSVTISWIKPLAPFEYYKLSYQSARGRVDSVVIDSDVTNFTLSSLFPATEYEIS
LNAVQGSQESKVVTTSVFTAMDMPSELTALNITPQGALLRWNPPLSNVDNYVLTLTQNQV
TADTFLVEGNKQEHQLSNLKPSTSYSVSLYATKGPLTSGTVITNLQTPMDSPLNLTASEV
NHRSALISWQPPIAEIDNYMLTYKTTDGSRKELILDAEDTWIRLEGLAETTEYTVKLQAA
RGLDTSAVVSTTFTTGSRLFATPQNCAQHLLNGENLSGIYTIYVNRDPSQGVQVYCDMTT
DEGGWIVFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQRIATQGRYELRIDMKD
GQESVYANYDKFSIGDARNLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCAL
SYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPFNFRSISSKR
RRSAPV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgccactgacacagcagcgtctcagggccactgtgcccgtaacaggctggattctggct
ttggctctgtttcttgctctacagggtgccgcacatgctgctccatcaggagacaacaag
ctggttcgcaccaccagagtgaggagacagaccccagggagggatcagcccccctctgcc
tcctcagccaatgagacactacgggagcaacccttggtcttcaaccatgtctacaacatc
aatgttccctttgaatcgctgtgctctgtggacctggacgcctccgcaccacctgaccca
ggtgatggctctcgtggtgagttgggctccagaccgtctatggaaggtccaatggatcca
gttggacagtcggagtatactgagcagacactggatgctgacagccagatgacattcact
caccgcatcaacatcccaaaagctgcgtgtggctgtccagcgtcaaccaccatccagcag
cttgccactagagtggagatgctggaaaaagaagtctccatgctcagagttcagtgtgga
tctggatgctgcggagagagttcagccatgggtcgtttagattttgtccccggctgcagc
ggccatggcagctttagctttgacctgtgtggctgtatctgcgaggaaggttggggtggc
aaaaactgctccgaacctcgctgcccggacgactgctctggccagggggtgtgcgtggaa
ggggagtgcgtgtgtgaccgtgactttggaggcgacaactgttctgagccgcgctgccct
tcagactgctcaggccgtgggttgtgtatcgacggcgagtgtgtatgtgaggagtccttc
accggggaggactgcatggtggggaggtgccttaacgactgctctgaccaggggctgtgc
atcaacgggacctgccagtgtcggcctgggtatgtgggagaggactgctcgctggtgtac
tgtgccaacaactgcagcaagaaaggggtctgcaaggatggcttctgtatctgccaggat
ggctttgctggagacgactgcaactctgtggcacccgcgatgaacctgaaggtacgaggc
gtgactgatagcactgtggacctggagtgggagggttcagttgtgctgacagatttcttg
gtgacatacacaccgagcagtcctggaggggtgcagctagagataaggctccctggaaat
gtcaccgcctgctctatctcaggcctcggagccggtattgagtacaacatcaacgtgttc
gccgtcattaacaacagtatcagcgtccccgcaagcatcactgtttcaacctatctctcc
aatccagatggtttagtcttcaaatccatcacagagacatcagtggaggtccggtggcaa
ccgttctacttttccttcgatggatgggagatcagcttcatccccaaggataatgatggt
ggcatgactgcacagctccctagcaccatcacttcctttgtgcagactggtctgagacca
ggagaggagtacacagtaaacctggtggcactgagagacgttggacgaagtcagccattc
actgcaacgtttacaacattgatcgacagccccactcagctgatcgtgcgggatgtgtca
gacactgtggcgtttgtagagtggacattgcccaaagcaaagatcgatcagatcattttg
cgctatggcctggtgggaggagagggtccacggaccaccttccgcctacagcctacgctc
agccagtactccctgcaggttctgcgtccaggttcacgttacgatgtatctgtgagcggt
gtgaggaaaggaaatgagagcggatctatttccactgaatttactaccgctttatcgttc
ttctcagagatcgatgccccaaagaaccttcggcttgtgaccaagacttcgaccaccctt
gagcttgaatgggataacagtgaagctgaggtggagggctaccaggtggtgtacagcact
ttggctggagacctgtatgacaaagtcatcgtcccacgtaacgagggagttacaaccaag
accactctcacagatctgctcccaggcacagagtatggcatcggtatctctgccatgaaa
ggtagtaaccaaagtacaccagcgaccatgaatgccaggacaggcttggatgtccctctg
gacctgactgttacagcctccacagacaacaccatcactctgttgtggggtgtggtccag
ggccccatcgaccattacaaagtcaccttcacatcctcttctggtgtcactaatgagctg
acagtgccgaaagatatcaccaccaccaccctgacagaccttgaacccggcactgagtac
accatcactgtagctgcgagaagaggaagacagcagagcacagcagcgactatagatgct
tttacaggaatcaggcccgttacacacctctacttgtcagaggtgacttcagactctgtg
tttgtggcctggagcgccccggcaccgcccgctgacctcttcatcctgagctacagctct
gctgacgggaccgacacctcgaaggtgacgctggaaggctccaagacgaggtcactggtc
cagggtctgctgccttccactgcatacaccatcagtctaatcacaatacagggggacgtt
acctctgagcccattctggcttcactcatcacaagcatggacccaccaaaggagatgacg
gtgtcagatgtaaccgaagactcagttaccatttcctggatcaaaccgctggctcctttc
gaatactacaaattgtcctaccagtcagccagaggtagagtcgacagcgtggtgattgac
agtgatgtgaccaacttcaccctgtccagtctttttcctgcaacagagtatgagataagc
ctcaacgctgtgcaggggagtcaagagagcaaagtggtcaccacctcagtcttcacagca
atggacatgccctccgagctgacggctctcaacatcactccacaaggagccctgctgagg
tggaatccccctctctccaacgtggacaactacgtgctgaccctcacacagaaccaagtc
actgctgatactttccttgtggaaggcaacaagcaggagcaccagctgtccaacctgaaa
ccaagcacctcctactctgtgtccctctatgccaccaaaggacccctcaccagcggcacc
gtcatcactaacctccaaacacccatggactcacccctgaacctgacagccagtgaagtg
aatcaccgcagcgctctcatctcttggcaaccgccaatcgctgaaattgacaactacatg
ctcacctacaagacgaccgacggcagccgcaaagagctgatccttgatgcagaagacacg
tggatacgactggagggactggctgagacaacagagtacaccgtcaagctccaggctgca
agaggactcgacaccagcgctgtggtctccaccactttcactacagggagtcgtctgttt
gcaacaccccagaattgtgcccaacacctgctgaatggagaaaacctgagtggcatctac
accatctacgtcaacagagaccccagccagggcgtgcaggtgtattgcgacatgaccact
gatgaaggaggctggattgtgtttcagcgtcgtcagaatggccttactgacttttccagg
aagtggagtgactatcgtgtcggctttggaaacttggaggatgaattctggctcggtcta
gacaacatccaaaggattgctactcaaggacgctacgagctgaggatcgacatgaaggac
ggacaggagtcggtctacgctaattatgacaaattctccatcggagatgcaagaaacctg
tacaagctcaggataggagagtacaacggcactgctggtgactccctgagctaccaccag
ggccgacctttctccacgaaagacagagacaacgacatcgctgtcactaactgtgccttg
tcctacaaaggagcctggtggtacaagaactgccaccgggccaacctcaacggcaaatac
ggcgagtccagacacagtcagggtattaactggtatcactggaaaggccatgaattctcc
attcccttcgtggagatgaagatgaggccgttcaacttccgtagcatcagcagcaagagg
aggcggtccgcccctgtataa
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