Halichoeres trimaculatus (threespot wrasse): 141804334
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Entry
141804334 CDS
T11192
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
htc04131
]
141804334 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
htc04147
]
141804334 (copa)
Membrane trafficking [BR:
htc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
141804334 (copa)
Exosome [BR:
htc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141804334 (copa)
Exosomal proteins of bladder cancer cells
141804334 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
141804334
NCBI-ProteinID:
XP_074544805
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETE
VRGISGVDLFGVSDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLSEEAEALKETFDP
EKETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIGAKGKAGQMAADLDMDAP
GGEGWGDDAELQLDEDGFMDAQEGLGDEGVGKEEGGGWEVEEDLDLPPELDMPAAGGGAE
DGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSFETAMRLLHDQVGVVNFGPYKSLFMQTL
SRGRTCYLGLPSLPCLRGHPQRNWKDCGAKQGLPAVGLRLSDLIARLQQCYQLTTAGRFE
EAVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLEQQKR
LCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAANFARRLLELGPKPDVAQQTRK
ILAACEKTPTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPTYKGQICRV
SQVTEIGKDVIGLRVSPLQFR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaaatttgagaccaagtcggcccgtgttaaaggccttagtttccatcccaag
aggccatgggttcttgcaagtttgcacaacggagtcatccagctgtgggactatcggatg
tgcacacttattgacaagtttgacgagcacgatggccccgtcagagggattgatttccat
aaacagcagcctctgtttgtgtccggaggagatgattacaagatcaaagtttggaactac
aagctgagacgctgcctcttcactctccttggtcaccttgactacatcagaaccaccttc
ttccatcatgagtatccctggattctgagtgcttcagatgatcagactattcgcatctgg
aactggcagtccaggacttgtgtctgtgtgctgactggccacaaccactacgtgatgtgc
gctcagttccacccctctgaggatctggtggtgtcagccagtctggatcagaccgtgcga
gtgtgggatatttctggtttgaggaagaagaatctgtctcctggtgctgtggagactgag
gtgcgcggcatctctggagtcgacttgttcggtgtctcagatgctgttgtcaaacacgtt
cttgagggtcatgaccgtggggtcaactgggcagccttccaccccagcatgcccctcatt
gtgtctggagctgatgacaggcaggtcaaaatctggagaatgaatgaatctaaggcttgg
gagctggacacatgccggggccactacaacaacgtgtcctgcgcagtgttccacccacgc
caggagctcatcctgtctaactctgaggataagagcatccgagtgtgggacatgtccaag
aggactggagtgcagacgttccgcagggatcatgatcgcttctgggtgttgggggctcac
ccaaacctgaacctgtttgctgcaggtcatgacagtggcatgatcgtgttcaagttggag
cgtgagcgtcctgcgtatgccgtgcacggcaatatgctgtactacgtcaaggatcgcttc
ctccgccagctggactttaacagcagcaaagatactgctgtgatgcagcttcgcagtggg
tccaagttcccggtgttcagcatgtcatacaaccctgcagagaatgccgtcctgctctgc
actagggcgaccaacctggagaacagcacctatgacctgtactctattcccaaagaaagt
gactctcagaaccctgatgcaccggaggggaagaggtcctctggtctaactgcagtctgg
gtggccaggaacagatttgccgtcctggaccgtatgcactctctgctgatcaagaacctg
aagaatgaaatcgtgaagaaggtccaggtgccaagctgtgaggagatcttctacgctggc
acaggctctctgctgctccgcgatgctgacggtgtcacgttgtttgacgtgcagcagaaa
cgctctctggcaaccgtcaagatcgccaaagtaaagtatgtggtgtggagtgctgacacc
agccacgtggccctgctggccaaacacgccatcatgatctgcaaccgtaagcttgagagt
ctctgcaacattcatgagaacatccgggtgaagagtggagcctgggatgagagcggagtc
ttcatctacaccacttccaaccacatcaaatacgctctcacctctggtgatcacggcatc
atcaggaccctggacctgcccatctatgtgacccgtgtgagaggaaacagcgtttactgc
ctggacagagagtgcaggccacgagtcctcaccatcgaccccactgagtaccgcttcaag
ctggccctggtcaaccgcaaatatgatgaggtgctccacatggtgcgtaatgctaagctg
gtgggccagtccatcatcgcctatctgcagaagaagggctaccctgaggtggctctgcac
tttgtcaaagatgagaagactcgattcagtctggctctggagtgtggaaacatcgaggtg
gctcttgaggcagctaaggccctggacgagcgaagctgctgggagcgtttaggtgaggca
gcgctgctgcagggacaccaccaggttgtggaaatgtgctaccagagaaccaagaacttt
gacaagctcaccttcctttacctcatcactggcaacctggccaaactgcgcaagatgatg
aaaattgctgagataaggaaggacatgagcggtcactaccaagcagccctatacctgggc
gatgtcagcgagagagtccgcatcctgaagaactgtggacagaagtctctggcctacctg
actgcagccactcatggactgagtgaagaggctgaggcgctaaaggagacctttgaccca
gaaaaggagacggtgccagaggttgatccaaacgcacagcttctgcagccgcctccaccc
atcaaccctctggacactaactggcctctgctcaccgtgtcaaagggcttctttgaggga
gccattggagccaagggtaaagcaggccagatggctgcagacctggacatggatgctcct
ggaggagagggctggggtgacgatgctgagctccagctggatgaagatggtttcatggat
gctcaggaaggactaggagatgaaggtgtaggaaaagaggaaggaggaggctgggaggtc
gaggaggacctggaccttcctccagagctggatatgccagctgcaggtggaggagcagaa
gatggcttcttcgttccacccactaagggcatgagtcccacgcagatgtggtgcaacaac
tcccagctgccggtggatcacatcctggccggctcgtttgaaactgctatgaggctgctc
catgaccaggtgggagtagtaaactttggcccctacaagtctctgttcatgcagacgctg
tccagaggccgcacctgttacctggggctgccttccctgccctgcctgcgtggccatcct
caaaggaactggaaggactgtggtgcaaagcaaggactgccagctgtgggcctgcgcctt
tctgacctcatcgctcgcctgcagcagtgctaccagctgaccacagccggacgctttgag
gaagctgttgagcgctttagagccatcctcctctctgtgcctctgctggtggttgataac
aagcaggaaattgcagaggctcagcagctgattacaatttgcagagagtacatagtgggt
ctgaccatggagacagagaggaagaagttgcctaaagatactttggaacagcagaaaagg
ctgtgtgagatggctgcttacttcacccactgtaatctccagccggtccacatggtgctg
gtgctgcgtacagctctgaatctcttcttcaagctgcgtaacttcaagaccgctgcaaac
tttgcacgacgcctgctcgagctggggccaaaaccagatgttgcacaacagacccgcaag
attttggcagcgtgtgagaagacaccgacagacgcccaccaactgaactacgatcctcac
aatccatttgacctttgcgctgcctcctttgttccactgtaccgtggtcgtcctgtggag
aagtgtcctctctctggagcctgctactgccctacatacaaaggccaaatctgcagggtc
tcacaggtgacagagattggtaaggatgtcatcggcctgcgtgtgagtcctcttcagttc
cgctga
DBGET
integrated database retrieval system
