Halichoeres trimaculatus (threespot wrasse): 141804698
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Entry
141804698 CDS
T11192
Symbol
rc3h1b
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htc03000
]
141804698 (rc3h1b)
04121 Ubiquitin system [BR:
htc04121
]
141804698 (rc3h1b)
Transcription factors [BR:
htc03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
141804698 (rc3h1b)
Ubiquitin system [BR:
htc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141804698 (rc3h1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-CCCH
zf-C3HC4_2
zf-CCCH_4
Prok-RING_4
zf-CCCH_UNK
zf_CCCH_4
FYVE
NS3_helicase_C
Baculo_IE-1
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
141804698
NCBI-ProteinID:
XP_074545390
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTD
IEQLPVNTALLQLVGGQVPKAQPVALITSPEDSQHYEEARQCVEELALYLKPLSNTRGVG
LSSTAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR
DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGSGGLMPDDGLPLDVAVTRKPS
PLTNGSGGSSMPQLIPRSTDTVPYELLRKPMKMDGGSPSAPGSPPEPMDPVAKPGMPLPP
HVMAHSRMPADHLSGVKHMSVQPRGLPVYPQQQLPEMCYDTRPPPPASQYEPAQYPTGYP
YQQYVPRDYIRNPPPPSESGPPYQDPYSSHFPPERPYQAPHSGPPFSYPHPPHHDRGRHG
TYAGPPPPPQPYPSQRDGMVRMSPAPLDVPPPSAGQTNSLYHQEPSARDRYAPEGYYPPG
TQPPPMRGYVRGPSYSGSQPSLDYLHRRRQELLSQLEERKVISPPPFAASPTLSHPFPSD
YPPEYGEESSKTMMKCREPDYAGQYSPWSCETIGSYIGTKDPKPKDVMGSMEMMNVEAKT
LRDPSLEAPRRGTEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPVQAMVPTAQNP
NSKHMAMPAEYTYGSQGGWGGSSYPSHQAASSSQGHFSERLPMAATDREQLKIELQQVNQ
QINQQTQMRSIEAANNPLLLQREASALAGQPVQPGQGQTVAATQQQQAKWPAGGASTSSI
SSQQLSLELDQVEREIGKRTREMALENQVAHDVQQYKMKPAENGQPEHKAQLEEISLALG
EVPNGSSSLQESAVGGSMLSLTNKTSALSLCSDPGATGSEMQKNGVVHSCS
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgcaagcaccacaatggacggagttcctgctgtgcccaatctgcacacagaca
tttgaagagactgttcgccggcccatcagcttgggctgtggacatactgtctgcaagatg
tgcctgaacaagttacaccgaaaggcctgtccctttgaccagacagccatcagcacagac
atcgagcagctacctgtcaacacagccctgttgcagctggtgggaggccaggttcccaag
gcccagccagtcgccttgattaccagtccagaggactcacagcattatgaggaggccaga
cagtgtgtggaggagctggctctctacctcaaacctctcagcaacaccagaggtgtgggt
cttagcagcacagcgcagagcatgctgagtcgacccatgcagaggaaactggtaactctg
gtccactgccagctggtggaggaagagggccgcgtgcgagccatgagagcagcccgctct
ctgggtgagcgaactgtcacagagctcatcttgcagcaccagaacccacagcagctctcc
tccaatctctgggctgctgtgcgtgctcgtggatgtcagtttctgggaccagccatgcaa
gaggaagctctaaagttggtccttcttgctctagaggacggctctgctctgtccaggaaa
gtgctggttctctttgtcgtccaaaggcttgagccacgcttcccacaggcctctaaaacc
agtataggccacgtggtgcagctcctctacagggcctcctgtttcaaggtgaccaaacgt
gatgaagattcatccctgatgcagttaaaagaagaattccgtacttatgaggcccttcga
cgtgagcatgactctcagatagttcagatagccatggagggtgggctgcgcattgcacct
gaccagtggtcctctctgttatatggagatcagtctcacaaatcacacatgcagtctatc
attgataagctgcagaccccagcatcttttgctcagagtgttcaggagctgacgattgca
ctgcagagaaccggggacccagccaacctcaacaggctgcggccccacctggagctactg
gccaacattgatcctagtcctgatgcccctcctccaacgtgggagcagcttgagaaaggg
ttggttgcagtgaaaacagtagtgcatggcctggtggactttatccagaaccacagcaag
aaaggagcggaccctcaacagcctcctcagcacagcaagtacaagacttacatgtgccgt
gacatgaagcagaagggcggctgtccacggggagccagctgcacctttgctcactctcag
gaagaactcgagaagtaccgtaagatgaataaacgtttggcagctcgcctccctggctca
ggagggctcatgccagatgacggccttcctcttgatgtagcagtgacacggaagccttcg
cccctcactaatggcagcggtgggtcctctatgccccagcttattcctcgtagcactgac
acagtcccatacgagctgctgcgtaaacccatgaagatggatggaggaagtccaagtgcc
ccaggatccccccctgagcccatggatcctgtggccaaacctggcatgcccctgccacct
catgtcatggcccactcaaggatgccagctgaccacctctctggggtgaagcacatgtct
gtacaacccagaggtctgccagtttaccctcagcaacagctccccgaaatgtgctacgac
actcgcccaccgccgcctgcttctcagtatgagcctgcacagtatccaacaggataccct
taccaacagtatgtcccacgggattacatacgtaaccctcctccaccaagtgagtcagga
cctccgtatcaggatccctattccagccatttcccaccagagcgcccctaccaggcccct
cactctggtccacccttctcctaccctcaccctcctcaccatgaccgaggtcgccacggg
acctacgctggtccaccgcctcctccgcagccttacccatctcagagggatggcatggtc
agaatgagtcctgctcctctggatgttccacctccgtcagccggacagaccaactcactg
taccaccaggagcccagtgcccgagacagatacgccccagagggttattatccaccagga
acacagccccctccaatgaggggctacgtcaggggtccatcatacagcggttcacagccc
agcctggactacctgcacaggcgcaggcaagagctgttatctcagctcgaggaaaggaag
gtcatctcccctccaccgtttgctgcctccccaactctttctcatcctttccccagcgac
tacccaccagagtatggcgaggagagctctaaaaccatgatgaaatgcagggagcctgac
tatgcagggcagtactccccctggtcctgtgaaaccattggctcctacatcggcacaaag
gaccccaaacccaaagacgtcatgggttcgatggagatgatgaatgtggaggcaaagacg
ctgagggatccatcactggaggctcctcggagggggacagaagtcaaggatgatgaccct
attatcccctttggtccacagcccactgtgtcacgctttggtgccatctcccgcacctca
aagacaggttaccagaccaccggccctgtgcaggccatggtccccactgcccagaaccca
aactctaaacacatggccatgccagcagaatacacatacggaagccaaggaggatggggt
ggatcttcatacccctcccaccaagctgcctcctcctctcagggacattttagtgagcgc
ctacccatggcagccacagacagagaacagttaaagattgagctgcagcaggtcaaccag
cagatcaaccaacagacccagatgagaagcatagaggctgccaacaaccctttactgctg
cagagagaggccagtgcattggcaggccagcctgtgcagcctggtcagggccagactgta
gcggccacacagcagcagcaggctaagtggccagcagggggcgcaagtacatcatccatc
tccagtcaacagctgagcctggagctcgaccaggttgagcgagaaattggcaagaggacc
cgagagatggctttggagaaccaagtagcccacgatgttcagcagtataagatgaagcct
gcagagaatggacaacctgagcacaaagctcagctggaagaaatctccctagctctgggc
gaggtgccgaatggctctagcagtctgcaagaaagtgcagtgggcgggtccatgctgtca
ctgaccaataagacgtctgcgctgagcctgtgctctgatccaggtgccactggttcagag
atgcagaagaatggtgttgtccattcctgctcctag
DBGET
integrated database retrieval system
