Halichoeres trimaculatus (threespot wrasse): 141805112
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Entry
141805112 CDS
T11192
Symbol
nup188
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141805112 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141805112 (nup188)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141805112 (nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup192
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
141805112
NCBI-ProteinID:
XP_074545958
LinkDB
All DBs
Position
Unknown
AA seq
1752 aa
AA seq
DB search
MXGTKMAESEMSVRSCRELWTILLGRSALREPAQIEAELNRHWNRLHQGLSYYKPPSSTS
AGKVKENKDVAQPLKDFGLRISKLLGLDEQQSVQLLQCYLQEDYRGTRDSLKVVLKDERQ
SQALLLKIADYYYDERMCLLRCVLLLLTYFQDERHPYRAEYSNCVNKLEKDLVSNYQAQF
EKLFKAEAPTWETHGNLMTERQVSLWFLQCLREQSLLLEIIFLYYAYFEMSPADLLSFTK
MFKEQGFGLRQTNRHLVNKSMDALVDRIGYLSSLILVEGMDIDFLHKCALEDCTEQHQFS
SAPEVIKEMDQLLLTFSDIPHHGPVLLAWVLLRHTLRPDESSPVIRRIGNSALQLGVFGY
ISTMLKGLGASGNNCTASTAKMCIYGLLSFVITSFEEESLQTDGVATQCSHLIDAACEVL
SAPSLAEVFWEMKPNMGLGMILDSAVGMFPHKIGPLLQLLTALLSNKSTVKKVYNFLDKM
SFYTQVYKHKPNDIISKDDETLWRRQTPKLLYPLGAGQTNLWMPQGVLGQVMIGGEQGYM
VRWDFSYSSWTLFTCEVEMLLHVVSTADVLAHCARVKPILDLVHKIISTDWTVSDCLLPL
TSRIYMLLQRLTSVINPPVDVIASCVNCLSVLAARMPGKVWSSLHHTGFLPFASNPLTSL
AQCVSAEGMKAGNYGNLLVQIEQPRGEYAVTIAFLRLVTTLVKGQLGSTQNKGLIPCVLL
VLKEMLPTYHKWRYNTYGVRERIGCLILELIHAILNLSPEGEDQGSTPTLQSLCIYSLAN
TEAGQAVVNIMGVGVDTIDVVLAAQPSSCGSEGPGQILIQTVKLAFSVTNNVIRLKPPSD
VVSPLEQALTQHGGHGNNLIVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGS
DAAAIRDAFLTRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSEGSKEFL
LGEWSCLHVVLDLIDSKQQGKYWCPPLLHRAALAFLLALWQDRRDSAISVLRKKDRFWEN
LTTPLFGTLTPPSDTTEPCVLETCAFVMKIIGLEIYYVVSGSLEQSLKDDLQKFSNARRY
EYWSQYVKSLVCHVAEMEEEGICYFPETQMLISAWRMLLILSTSHADVMQLTEDSTKLKL
FMDVLDGTKATLTTPTSGPCLRLGSMMATLLLILLKQWKSVVASAPDILSPLSLILESVL
QADQQLMERTKAKIFSALISVLQIQGLNGGDISQLPQLLLSVCETVKDEAVALIDNTRHM
NQAGETQAEDEDSMETDSPRGQQKDQRDGVCVLALHLAKELCRTDEDGEHWVSVMRKVPV
LPSVLSAVELSLRSKHNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQTICLPLLSVYEV
SANGASQGFSRKSQDSACWPGVYRLCMSLMESLLKTLRYNFINEALDFVGVHQERILQCL
NAVRTVQSLACLDEADHTVGFLLQLSSFCKEWQFHLPKLLRDIQVNLCYLCQTCTYLLHS
KKMLHHYLQAKNGEALPPGHLPRTQRPPQTPSKEAAGGEEREEAEQKALLAVQCSLLKIL
SKTLATLQHFTPDCCQILLDQSMDLAEYRTLFVLSFTTPAFDPDVAPSFGTLLATINVAL
SMLSEMEKKKEPVSLSIVSLASSEEIQALKSLLMFTMENCFYVLISQAVRCLKDPSIVPR
DKQRLKQELSSELSTLLSSLSRHFRRGSPSSPASGILPSTQSKPPTPGSKASHEGQEPFI
QLVQAFVRLVQR
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atgtaaggaacgaagatggcggaatcggagatgagtgtcaggagctgccgagaactatgg
accatactgctgggacgatctgcgttgcgagagccggctcagattgaagccgagctgaac
agacattggaaccgactgcaccaaggactcagttactacaagccacccagctcaacctct
gctgggaaagtgaaggagaacaaagatgttgcacagccgttgaaggattttggtctgagg
atcagtaaactattgggtctggatgagcagcagagtgtgcagcttctacagtgctaccta
caggaggactacagaggaacacgagattcattaaaggttgtcctgaaagacgagcgtcaa
agccaggcgcttttgctgaagattgctgactattactatgacgagcgcatgtgtctgctc
agatgtgttctgctcctgctgacatactttcaggatgagcgacatccctacagagctgag
tacagtaactgtgtcaacaaactggagaaggatttggtgagcaactaccaggcacagttt
gagaagctcttcaaagcagaagcaccaacatgggagactcatggcaacctcatgacggag
aggcaggtgtcactgtggttccttcagtgtctcagggaacagtctctgctgttggagatc
atcttcttgtattacgcctactttgagatgagcccggcagacctgctgagcttcaccaaa
atgttcaaagagcaaggctttggtctgaggcagaccaacagacacctggtcaacaagagc
atggacgcgctggtggaccgcatcggttatttgagctctctcatcctggttgaaggaatg
gacatagacttcctgcataaatgcgccctggaggactgcacagagcagcaccagttctcc
agcgctcctgaagtcatcaaggagatggatcagctgctcctcacgttcagtgacatccct
catcacggtccggtgctgctggcgtgggtcctgctgagacacactctgaggccagacgag
tccagcccggtgatcaggaggataggcaacagcgccctgcagctgggagtgttcggctac
atttccaccatgctgaaaggcctgggagcctctgggaacaattgcacggccagcacggct
aagatgtgcatctacggcctcctctcattcgtcatcacttcttttgaggaggaaagctta
cagactgacggcgtggcgactcagtgctcccacctgatcgacgcggcctgtgaagtcctc
tctgctcccagcctggctgaggtcttctgggaaatgaaacccaacatgggattagggatg
atcctggacagtgcagtcgggatgttccctcataagatcggaccacttctacagctcctc
acggctcttttgtcgaacaagtcgactgttaaaaaggtttacaacttcctggacaagatg
tccttttacacccaagtttacaaacacaaacccaacgacatcatctcgaaggacgacgag
acgctgtggaggagacagacgcccaaactcctctaccctctcggcgcaggtcagacgaac
ctgtggatgcctcagggagttctcggtcaggtgatgatcggaggcgagcagggctacatg
gttcgctgggatttctcctacagctcctggacgctgtttacctgcgaggtggagatgctt
cttcacgttgtttcaactgcagatgtgttagcccactgtgcgcgtgtgaagcccatcctg
gatctggtccataagatcatcagcacagactggactgtgtccgactgtctgctgcccctc
acgtctcgaatctacatgttgctgcagaggttaacctcggtcattaatcctcctgtggac
gtgatcgcctcctgtgtgaactgtctctctgttctggctgcgaggatgccggggaaggtt
tggtccagtctgcaccacacggggttcctccccttcgcctccaaccctctgaccagcctg
gctcagtgtgtgagtgctgaagggatgaaagctggtaactacggcaacctgctggtccag
attgagcagccgaggggggagtacgcggtgaccatcgccttccttcgtcttgtgacgact
ctggttaagggtcagctgggcagcacacagaacaaaggcctgatcccgtgtgtgctgctc
gtgttgaaagagatgctgccgacgtaccacaagtggcgttacaacacgtacggcgttagg
gagaggataggctgcctcattctggagctgatccatgccatcctcaacctgagcccggag
ggagaggatcagggcagcactcccaccctgcagtctctctgcatctacagcctggcaaac
accgaggccggacaggccgtggtcaacatcatgggggtcggcgtggacaccatagacgtg
gtccttgctgctcagcccagcagctgtggctccgagggtcccggtcagatcctgatccag
accgtcaaactggccttctccgtcaccaacaacgtcatccgcctgaagccgccgtctgat
gtcgtgtctcctctggagcaggcgctgacgcaacacggtggtcacggcaacaacctcatc
gtcgtgttggcgaaatacatctaccacaaacacgacccggcgctgcctcgtctggccatc
cagctgctgaagcggctcgccaccgtggctcccatgtccgtgtacgcctgcctcggcagc
gacgcggcggccatccgtgacgcgttcctcactcgacttcagagtaaaaccgaagacatg
cggatcaaggtgatgatcctggagttcctgaccgtggcggtggagacacaacccggactc
atcgagcttttcctcaacctggaggtcaaagatggatctgaggggtcaaaggagttcctg
ctcggggagtggagctgtctccacgtggtcctggacctgatcgactccaaacagcagggg
aagtactggtgtcccccgctgctgcaccgagccgccctcgccttcctgctcgctctgtgg
caggatcgcagagacagcgccatctctgtcctacggaagaaagacaggttttgggaaaat
ctaacgacgcctctctttgggactctgacgccaccttcagacaccacagagccttgtgtt
ttggagacgtgtgcgttcgtcatgaaaatcatcggccttgagatctactacgtcgtcagc
ggttccctggagcagtctcttaaagacgacctccagaagttttccaacgcccggcgatac
gagtactggtcccagtacgtgaagtctctggtgtgccacgtggcggagatggaggaggaa
gggatctgctacttcccagagactcagatgttgatctccgcctggaggatgctgctcatc
ctctccaccagtcacgccgatgtgatgcagctcacagaggactccaccaaactgaagctc
ttcatggacgtcctggacgggaccaaagctacgctcaccacgccgacgtccgggccctgc
ctccgcctgggctccatgatggccaccctgctgctcatcctgctcaaacagtggaaaagc
gtggtggcgtcagcccccgacatcctgtcgccgctctccctgatcctggagagcgtcctg
caggccgaccagcagctgatggagcggaccaaggccaagatcttctccgcgctcatctct
gtgctgcagatccagggactcaacggtggggatatttcccagctgccccagctgctgctg
tctgtgtgtgagacggtgaaggacgaagcggtggcgctcatcgacaacacgcgacacatg
aaccaggcgggggagacgcaggcggaggacgaggacagcatggagacggattctccacgc
ggccagcagaaggaccagagagacggggtgtgcgtgctcgctctgcacttggcgaaggag
ctgtgtcgcaccgacgaggacggcgagcactgggtctctgtgatgagaaaggtcccggtc
ctcccctccgtgctcagcgctgtggagctcagcctgcgatccaaacacaacctgtacttc
acagaagctgcgctgcacctgctgctgacgctggcccgcacgccgcagggggcagcagct
gttgcaggagcaggagtcatccagaccatctgcctccctctgctgagcgtctacgaggtg
tccgctaacggagcatcacagggtttctcccgaaagtctcaggactcggcgtgctggccc
ggagtttaccgcctctgcatgtctctgatggagagtctgctcaaaactctgagatacaac
ttcatcaacgaggctctggactttgtgggggtccatcaggagcggattctgcagtgtctg
aacgcagtgcggacggttcagagcctggcgtgtctggacgaggccgatcacacggtcggc
ttcctgctgcagctctccagcttctgtaaggagtggcagtttcacctccccaagctgctc
cgagacatccaggtgaacctgtgctacctgtgtcagacctgcacgtatctgctgcacagc
aagaagatgctgcatcactacctccaggctaaaaacggagaagcgttacctccaggccac
ctccccaggacgcagcgcccccctcagaccccgtctaaagaagcagcaggaggagaggag
agggaggaggcggagcagaaagctctgctcgccgtgcagtgcagcctcctcaagatcctc
agtaagactctggcaacgctgcagcacttcactccagactgctgccagatcctcctggac
cagagcatggacctggcagagtacaggaccctgtttgtgctcagcttcaccaccccggcc
ttcgaccctgatgtggcgccgtcgtttgggaccctgctggccaccatcaacgtggctctg
agcatgttgagcgagatggagaagaagaaagaaccagtttctctgagcatcgtgtctctg
gcttcatcagaggagatccaggctctgaagtccctgctgatgttcaccatggagaactgt
ttctacgtgctgatctctcaggccgttcgctgcctcaaagatccctccatcgtcccgcga
gacaaacagaggctcaaacaggagctcagctctgaactgagcactctcctctccagtctt
tcccgacacttccgtcggggctctccatcgtccccggctagcggcatcctcccctccacg
cagtccaaaccgccaacgccgggctccaaggcgagccacgaaggtcaggagccgttcatc
cagctggttcaggcgtttgtccgcctggtgcagagatag
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integrated database retrieval system
