Halichoeres trimaculatus (threespot wrasse): 141805388
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Entry
141805388 CDS
T11192
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141805388 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141805388 (fip1l1b)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141805388 (fip1l1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
141805388
NCBI-ProteinID:
XP_074546532
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MSAEEADKTATTDASAGDEEEEWLYGDESESKDEDEEAKLNAAINAPADASTEDGAEHAT
GNGVASEATGEAAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIKTTG
SRPYGQATKLKGVDLDAPGNINGVPVLEVDMESFEEKPWRKPGADLSDYFNYGFNEDTWK
AYCDKQKRLRMGLEVSNIGSVTSKITVQQGRTGNEKDMSVLPVHTSKPDFTSPVSVYKSA
VSQVTSRISPPQWTGPPVQDMSYYTKSSGTIDVIGGQTATISRVEGRRRHNADGNNIQVI
AEQSDSEPTPAKLPAFFPPGPLPPNIPPPPFLPPPPNVSAAPPLIPPPRLPITVPPPGFP
PPPSGPPPSIIPTMDGSHPGSYDGRSVPPYPFPQGAYPPPMTGGPPPWPPMMDNSKPWDN
YYRREDKREKERERPRERTHEREREREHSPSAMGYTSDEERYRYREYQERGYGERHRDRA
SREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASE
EISADQENQEAMD
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaggcggacaaaacagccaccactgatgctagtgctggtgatgaggag
gaggaatggctgtatggagatgagtctgagagcaaagatgaggacgaggaagccaaactg
aatgctgcaatcaatgcacctgctgatgcctcaacggaggatggagcagaacatgctaca
gggaacggtgtggcctctgaggccacaggtgaagctgcaggggaagatgttgacagtgac
agtgacagtgatgacgacgatgatgatgtccgtgtcaccattggagacataaaaactgga
gcgccacaatacacaacatatggggctccacctgtcaacctcaacataaagacaacaggc
tcaaggccttatgggcaagcaactaagctgaagggagtggatctagatgcccctggaaac
ataaatggggtcccagtgctggaggtggacatggagtcatttgaggagaaaccctggagg
aagccaggagcggatctgtctgactactttaactacggcttcaacgaagacacatggaag
gcttactgtgataaacagaagagactgcgcatgggactagaggtctcaaacattggctca
gtaacaagcaagatcacggttcagcaggggaggacaggcaatgagaaggacatgtctgtt
ttgcctgttcacacctccaagcctgacttcacatctcctgtcagtgtgtacaagtctgct
gtcagtcaggtcaccagtaggatctctccccctcaatggactggcccgcctgttcaggac
atgtcctactatacgaagtccagtggtaccatagatgtgattggtggacagacagctacc
atcagcagggtggaagggcgacgcaggcataatgcagatggcaacaacatccaggtgatc
gccgaacaatcggactctgagccaactccagccaagttacctgctttcttccctcctgga
ccacttcctccaaacatacctccacctccattcctcccaccaccacccaacgtcagcgct
gcacctcccctcatccccccaccaagattgcccattactgtcccacctcctggtttccct
cctccacccagtgggcctcctccatctattatccccactatggacgggagccaccctggt
agttatgatggacgctctgttcctccctaccccttcccccaaggtgcataccctccaccc
atgactggaggtcctcccccttggccacccatgatggataactctaaaccctgggacaac
tattaccgtcgagaagataagagagagaaggaaagagagcggccacgagagaggacacat
gagcgggagagggagcgggagcacagcccgtctgctatgggttacaccagtgatgaggag
cgttaccgttaccgtgagtatcaggagcgaggctacggagagcgacatcgtgaccgggca
agccgagagaaagaggagagacacagagagaggcggcacagagagaaggaggagggacgc
cacaagtcctcacggagtagcagtagcaggcggaggcacgacagtgaggagggcgacagc
caccggaggcacaaacacaagaagagcaagagaagcaaggagggcaaagaggccagcgag
gaaatcagcgcagaccaggagaaccaggaagctatggattag
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