Halichoeres trimaculatus (threespot wrasse): 141805593
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Entry
141805593 CDS
T11192
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
htc03009
]
141805593 (ddx55)
Enzymes [BR:
htc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141805593 (ddx55)
Ribosome biogenesis [BR:
htc03009
]
Eukaryotic type
Pre-60S particles
Helicases
141805593 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
Cas3-like_C_2
Cadherin_3
YbjM
Motif
Other DBs
NCBI-GeneID:
141805593
NCBI-ProteinID:
XP_074546809
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MSVMENTTDGTWDSLPVQLHESILETLRELKFTHMTPVQSACIPLFMGNKDVAAEAVTGS
GKTLAFVIPILELLLKREEKLKKMQVGALVVTPTRELALQISEVMEQFIQKFPQFKQILL
IGGTNPVEDVEKFKEQGANIVIATPGRLEDMFRRKSEGLDLAGSVRSLDVLVLDEADRLL
DMGFEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAATAVQK
TPSRLSNYYTVCKAEDKFNNLVAFLRQHKHEKNLVFFSTCACVEYYGRTLETLIKKVSVH
CIHGKMKTKRNKIFADFRALKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHRCG
RTARIGNQGNALVFLLPMEETYVNFLSINQKCPLQLMPPIGDVVDVLPKVQAMSLADRAM
FDRSMRAFVSYVQAYAKHECSLIFRVKDLDFATLARGFALLRLPKMPELRGKNFPNFTPT
TVDTETIRYKDKNREKQRQKMLAELKDKEKTPLPRKNFTRNKAWSKQKNKKERRRKNAAK
RKLDQDSEAEDEDLSELLNDTRLLKKLKKGRITAEDFEEQITNGPKSKHKPAAANCSEGE
DVEALSENL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgatggaaaacacgacggacgggacgtgggacagtttacctgttcagctccac
gagagcatcctggagactctgcgcgagctcaaattcactcacatgacacctgtacagtcg
gcctgtatccctctcttcatggggaacaaagatgtggctgctgaggcggtgactgggagc
gggaagacgctggcctttgtcatcccgatcctcgagctgctcctgaagagagaagagaag
ctgaagaagatgcaggtcggagcgctcgtggtcactcccaccagagagctggctttgcag
atcagtgaagtcatggagcagttcatccagaagtttcctcagttcaagcagattttactg
atcggaggaaccaaccctgtcgaggatgtggagaagttcaaggagcagggtgcaaatatc
gtcatagcaaccccaggccgtctagaggacatgttcaggaggaagtctgaaggtctggac
ttggcaggctcggtcaggagtctggatgttctggttctggatgaggctgacagattattg
gacatgggcttcgaggccagtctgaacaccatcctgggctacctgcccaaacagagacgc
actggtttgttttcagccactcagacgcaggagctggagaagctggtgagggcggggctt
aggaaccctgtacgcatcactgtcaaggagaaaggtgtggctgccactgctgtccagaaa
acgccgtccagactctccaactactacacggtgtgtaaggctgaggacaagttcaacaac
ctggtggcgtttttacggcaacacaagcacgagaagaacttggtcttcttcagtacctgt
gcgtgtgtggagtattacggtcgaactctggagactctgataaagaaggtctcagtccac
tgcatccacggaaagatgaaaaccaaacgcaacaagatctttgcagacttccgcgctctg
aagagcgggatcttggtgtgcacagacgtcatggccagaggcatcgatatccctgatgtg
aactgggtgctgcagtacgatcctcccagcagtgccagcgcttttgttcatcgctgcgga
agaaccgcacgaatcggaaatcagggaaacgctcttgtctttctactgccgatggaggag
acctacgtgaacttcctgtccatcaaccagaaatgcccgctgcagctgatgccccctatt
ggtgatgtggtggatgtgctgcccaaagttcaggccatgtctctggctgaccgcgccatg
tttgacagaagcatgagagcgtttgtgtcgtacgtccaggcctacgccaaacacgagtgc
agcctcatcttcagagtcaaagacctggattttgccaccctggcccgaggtttcgccctc
ctccgcctgcctaagatgcccgaactgagggggaaaaacttccctaacttcacaccaaca
acagtggacacagaaaccatccgctacaaagacaaaaaccgcgagaaacagagacagaag
atgctggccgagctgaaagacaaggagaagactccacttcccagaaagaacttcaccagg
aacaaagcctggtccaaacagaagaacaagaaggaacgccgcaggaagaacgccgctaag
aggaaactggatcaggactctgaggctgaggatgaagacctgtcagagcttttaaacgac
acccggctcctgaagaaactaaagaaaggacgaatcacagctgaggactttgaggaacag
ataaccaacggaccaaaatccaaacacaaaccagcagcagcaaactgctcagagggagag
gacgttgaagctttgagtgaaaacctttaa
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