Halichoeres trimaculatus (threespot wrasse): 141805709
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Entry
141805709 CDS
T11192
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141805709 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
htc04990
]
141805709 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
htc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
141805709 (pdlim5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
141805709
NCBI-ProteinID:
XP_074546987
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSSSYNVTLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAAKAKMSIGDIILSIDGISTE
SMNHLEAQNKIKACTDCLSLTLQRPSSAPKNGVPKDEPQEIIKPVPITHPASNTAYTKPV
SQPSPAYNKTARPFGAGGGVLTGSSTPDAPKVATIPSASSAFTPAAPSQPQPPFPLKSSP
APVDSTPASSVPKPSSGRSPFASPYSSSSSSNSSSPARVTAPSSNPNVPQSSVYNTPINL
YSSSNACEVAMGQRRGLLESQGLSEHFNGKLIDEPENHASPLSDSSKKRLIEDTEDWHPR
TGTCQSRSFRILAQLTGTENEQVPENSGKNEPVDNTTPAVHTSPAAKPFSKSAATPRNGN
VVPASSFKSPAAQNKSPFQSGGLPGFPKGGAAPSFGKVTAPVQKGPDRPVPQPHPQDLSS
LVQQAEHIPAGTRTPMCNKCNSVIRGPFLVAMGMSWHPEEFNCAHCRSSLIDHGFVEEKG
QVYCPNCYEQFFAPSCARCNQKILGEVMNALKQTWHVSCFVCAACYQPIKGNMFHMEDGQ
PYCEQDYYSLFGTNCHGCDFPIEAGDKFLEAMGFTWHDTCFVCAVCSTSLEGQPFFSKKD
KALCKKHAHSVNV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacaacgtcaccctggctggccccgccccctggggcttcagactacag
ggagggaaggacttctgtctgcccctcaccatctcacggctcacagatggagggaaggca
gccaaagcaaagatgagcattggagacatcattctgtccattgacggcatttccacagag
agcatgaatcacctggaggcccagaacaagattaaggcctgcacagattgcctgagcctc
actctacagagaccctcaagtgcccccaaaaatggagtgcccaaggatgaacctcaggaa
atcataaagcccgtccccatcactcaccctgcctcaaacaccgcatacaccaagccagtc
agtcagcccagtcctgcttacaacaaaactgcccggccttttggcgccggtggcggtgtc
ctcacgggctcctccaccccagacgcccctaaagtagcaaccatcccctctgcatcatcc
gctttcacgccagctgccccttctcaaccacagcctccattcccgctgaagtcgagccca
gcacctgtggactcaactccagccagctcagtcccaaagcccagctctggtcgctctccc
ttcgcttccccttactcctcttcctcctcatctaactcctcctctccagcgagagtgaca
gccccctcctccaatcctaatgtcccacagtcctctgtctataacacgcccatcaacctg
tactcctcgtccaatgcctgtgaggtggctatgggacagagacgaggtcttttggaaagc
cagggtctgtcggagcacttcaatgggaaactgattgatgagcccgagaatcacgcgtcc
ccgctcagcgactccagtaagaaacgtctgattgaggacacagaggactggcatccgaga
actggcacctgccagtcccgctccttccgtatcctggcccagctcactggcactgagaat
gagcaagtaccagaaaacagtggaaagaatgagcctgttgataacaccactccagctgtg
cacacctcgcctgcagcaaaacctttttccaaatctgcagcaacacccagaaatggcaac
gtcgtccctgcatcctcgtttaagagcccagcggcccagaacaaatcacccttccagtct
ggaggtctaccaggttttccaaagggtggagctgctccttcatttggcaaagttactgcc
cctgtgcaaaaaggtccagaccgccctgtcccacaaccacacccacaggacctcagctct
ctggtgcagcaggcagagcacatcccggctggtactcgcaccccaatgtgtaacaaatgc
aacagtgtgatcaggggtccttttcttgtggccatgggcatgtcctggcaccctgaggag
ttcaactgtgctcactgccgctcctccctgatagaccacggctttgtagaggagaaagga
caggtgtactgtcctaactgctacgagcagttctttgctcccagctgtgcacgctgcaac
cagaagatccttggggaggtcatgaatgccctgaaacaaacttggcatgtgtcctgtttt
gtctgtgccgcctgctatcagccaatcaaaggcaacatgttccacatggaggatggacag
ccatactgtgaacaagactactacagcctgtttgggacaaactgtcatggctgtgacttc
cccatcgaggctggagataagttcctggaggcgatgggattcacctggcatgatacctgc
tttgtgtgtgcggtgtgctctaccagcctggaaggtcagccattcttctctaaaaaagac
aaagctctgtgcaagaagcatgcccacagtgtcaatgtctga
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