Halichoeres trimaculatus (threespot wrasse): 141805884
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Entry
141805884 CDS
T11192
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
htc03009
]
141805884 (ddx54)
Enzymes [BR:
htc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141805884 (ddx54)
Ribosome biogenesis [BR:
htc03009
]
Eukaryotic type
Pre-60S particles
Helicases
141805884 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
141805884
NCBI-ProteinID:
XP_074547209
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MAQRKKKLTKKKRHTGSREWEADSDSGDFELAAQVKDDEATGRKLPRFPASSDHLSDVEP
DTRELVRAQNKKKKKSGGFQSMGLSYPVYKGVMKKGYKVPTPIQRKTIPVILDGKDIVAM
ARTGSGKTAAFLVPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLKTAL
ILGGDRMDDQFAALHENPDIVIGTPGRLMHVIKEMNLKLHSVEYVVFDEADRLFEMGFAE
QLQEIIRRLPDTRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSLFHLR
VDDKPALLLHLLRNVVKPQEQTVVFVATKHHVEYLKELLSSEGLDCAYIYSALDQTARKI
NIGKFVHRKAMVLIVTDVAARGIDIPLLDNVINYNFPSKAKLFLHRVGRVGRAGRRGTAY
SMVCQDEMAFVYDLHLFLGRPVQFATAEHAKDSDGVFGRVPQSILDDESSHLITAHENSL
DLQNLHRISENAYKQYLKSRPHPSPESIRRVKSTDLSCMAVHPLLGSGLEKMELERLHIV
DAIKGYKSRSTIFEINSSSKTQASEVMRAKRSKDTRLVDKFSKQRDDLAAESRLQTPANA
TAEDDGLSHSSGDDDDENDDALQEVFSSVVGGKRKVQQRDGEERPRSKKSKQSGKDEEYY
IPYRPKDFNSERGLSLSGEGSAFEKQASSAVLDLMGDEGERMNQHKRIMKWDRKRKRFVT
ETGKEDQKKKIRTDGGQVISNKKNRKNFYEEWKKKYKVDDAGSGSDGETGGGRRPGGGRG
RGRGRRGANPQNPNHQRPVGQQTTPDGRRVRSELKTREQILKQRKKQQKHKFLQSGGLKN
LRGRNKQWVGEVKRSGFGRGGQKKGKMRKKL
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaggaagaagaaactgacgaagaagaagaggcacacaggaagcagggagtgg
gaggcggactctgacagcggagacttcgagctggctgctcaagttaaagacgatgaagct
acggggaggaagctgccgcgcttccctgcgtcctcagaccacctctcagacgtggagccg
gacaccagggagctggtcagagcccagaacaagaagaagaagaagtctgggggcttccag
tccatggggctcagctacccggtctataaaggtgtcatgaagaagggttataaagtcccc
acccccatccagagaaagacgatccccgtgatcctggacggcaaagacatcgtggccatg
gcgaggaccggcagcggtaagactgctgccttcctcgtgcccatgtttgagaagctgaag
gccccccaggcccagaccggagccagggccctcatcctgaccccaaccagagagctggcc
ctgcagaccatgaagttcaccaaagagttaggaaagttcacaggcctgaagaccgccctg
atcctgggtggagacaggatggacgaccagtttgctgctcttcatgaaaaccccgacata
gtcatcggcacccccggtcgcctcatgcacgtcatcaaagaaatgaacctgaagctgcac
agcgtggagtacgtggtgtttgacgaggccgacagactctttgaaatgggttttgctgag
cagctccaggagatcatccggagacttccggacactcgtcagactctgctgttctcggcc
acgctgcccaaactgctggtggagttcgcccgagcaggtctgactgaaccggtgctgatc
cgtttggatgtggactcaaagctcagtgatcagattaagctgtcgcttttccatctgcga
gtggacgacaaaccggccctgctgctccatctgctgaggaacgtggtcaaacctcaggag
caaaccgtggttttcgtggccaccaagcaccacgtggagtacctcaaagagctgctgtcc
tcagagggtctggactgcgcctacatctacagcgccctggaccagaccgccaggaagatc
aacatcgggaagtttgtgcatcggaaagccatggtgctgatcgtgacggacgtcgccgct
cgtggtatagacatccccctgctggacaacgtcatcaactacaacttcccgtccaaagcc
aagctcttcctgcacagagtcggccgtgtggggcgtgccgggcgcagaggcacggcgtac
agcatggtgtgtcaggatgagatggcgtttgtctacgacctccacctcttcctggggagg
ccggtccagttcgccacggcggagcacgccaaagactcagacggcgtgttcggccgggtc
cctcagagcatcctggacgacgaaagctcccacctcatcacggctcacgagaactccctg
gacctgcaaaacctgcaccgaatctcagagaacgcctacaagcagtacctgaagtcccgc
ccccacccctcccctgagtccatcagacgcgtgaagagcaccgacctgtcctgcatggcc
gtgcacccgttgttagggtccggtttggagaagatggagctggagcggcttcacatcgtc
gacgccatcaaaggatacaaatccagatcaaccatctttgaaatcaactccagcagtaaa
acacaggccagcgaggtgatgcgcgccaaacgctccaaagacacgaggctcgtcgacaaa
ttcagcaaacagagggacgacctggctgcagagagccggctgcagacgcccgccaacgcc
acggccgaggacgacgggttatcacactcttcaggcgacgacgacgacgagaacgacgat
gctctgcaggaggtgttctcctctgtggttggtggaaaaagaaaagtgcagcagagagac
ggagaagagcggccgaggagcaaaaagagcaaacagtcggggaaagatgaggagtactac
atcccgtacagacccaaagacttcaactcagagcgagggttgagcctcagcggagagggc
agcgcctttgagaagcaggcgtcctcagccgtcctggacctcatgggggacgagggcgag
aggatgaaccagcacaaacggatcatgaaatgggaccgcaagaggaagcgctttgtcaca
gagacaggaaaggaggaccagaagaagaagatcaggacggacgggggacaggtcatcagc
aacaagaagaacaggaagaacttctacgaggagtggaagaagaaatacaaagttgatgat
gcaggctcagggtcagatggagaaactggaggaggaagaagaccaggaggaggtcgaggc
cgtggccgcggccggcgtggcgccaaccctcagaatcccaaccaccagcggccggtcgga
cagcagacgacgccggacggccgcagagttcgctcggagctgaagacgcgcgagcagatc
ctgaagcagaggaagaagcagcagaaacacaagttcctgcagagcgggggactgaaaaac
ctgcgcggcagaaacaagcagtgggtcggggaggtgaagaggtccgggttcggacggggc
gggcagaagaagggtaagatgaggaagaagctctga
DBGET
integrated database retrieval system
