Halichoeres trimaculatus (threespot wrasse): 141806177
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Entry
141806177 CDS
T11192
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04137
Mitophagy - animal
htc04140
Autophagy - animal
htc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141806177 (hif1aa)
04137 Mitophagy - animal
141806177 (hif1aa)
04148 Efferocytosis
141806177 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htc03000
]
141806177 (hif1aa)
Transcription factors [BR:
htc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
141806177 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
141806177
NCBI-ProteinID:
XP_074547583
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MDTGIVPEKKRVSAERRKEKSRDAARCRRGKESEVFYELAQELPLPHSVRSSLDKASIMR
LTISYLRMRKLLSTDELTAEEQTELDEQLNSSYLKALEGFLMVLSEDGDMIYLSENVNKC
LGLAQFDLTGHSVFDFIHPCDQEELREMLVHRTGSKKAKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLQCSGHVQVYENNSEQTSNDQKEPPFPYLVLICDPIPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQTEDV
KPIKEEQKQQEEEEEAEVVEEEAEEKSVVESSQPDVSPTLLKEEKAPELDVVKLFTQTVE
ARSFPSLYDQLKEEPEALTLLAPAAGDTIISLDFSCPDSEIQLLKDVPLYNDVMLPSTSD
KLVLSPLPNSEPLCVNTASKDDKPESYTASPSTATSHSSSETDSTVDFCFPMDSEMSSDF
KLDLVEKLFAIDPEPKTPFATQAMEELDLEMLAPYIPMDDDFQLRSLSPDEPLSSGPVKS
LESSPVSVTQDIHSFPSSPFSSPSSRTASPAPPEPVSVSHLATIFSKRTLQVDKEVALRT
LAAQNTQRKRKLGDLKQIIGQGTLPTEQVEPGKKLRTSELGSTTAILLLPSDVASRLLGS
TSEGTSSLFTLPQLTRYDCEVNAPLQGRQYLLQGEELLRALDHVN
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtaccagaaaagaaaagagtgagcgccgagcggaggaaggagaag
tcgagggatgcagcgcgatgtcggcgcgggaaagagtcggaggtgttctacgagctggcc
caggagctgcccctgccccacagcgtccgctccagcctcgacaaggcgtccataatgagg
ctcaccatcagctacctgcgcatgaggaaactgctcagcaccgatgagctgacggcagag
gaacaaacagagcttgatgagcaactgaacagctcctacctgaaggctctggagggtttt
ctcatggtgctgtctgaagacggagatatgatctatctctctgagaatgtcaacaagtgc
cttggcttggcacagtttgaccttacaggacacagcgtgtttgacttcatacatccctgt
gaccaggaagagctgagggagatgctggtccacagaacaggctccaaaaaggccaaggaa
ccaaacacagagcgcagcttcttcctcagaatgaaatgcacgctcacaagcagaggccgc
actgtcaatgtcaaatctgctacatggaaggtgcttcagtgctcaggtcacgtccaggtt
tatgagaataactctgagcaaacttccaatgaccagaaggagcctcctttcccctacttg
gttctgatctgtgaccccattcctcacccttccaacatcgaggtccctctggacaccaag
accttcctgagccgccacaccatggacatgaagttcacgtactgtgatgagagaatcact
gaactcatgggttacgatccagaggacctgttgaatcgttcagtgtatgagtactaccat
gctctggactcagaccatctcaccaagactcaccacaacttgtttgcaaagggacaggtc
agcacaggccagtaccgaatgttggccaagagaggaggctttgtgtgggtggaaacccaa
gccactgttatctacaacaacaagaactctcagccacagtgtgttgtctgtgtcaacttt
gtgctcagtggcatccaggaagagaaactcatcttgtcactggagcagacagaggatgtg
aaacccataaaggaggagcaaaagcagcaggaggaggaagaagaagcagaagtagtagaa
gaagaagcagaagaaaagtctgtcgttgagagcagccagcctgatgtgtctccaaccctg
ctgaaggaggagaaggctccagagctggatgtggtcaaactattcacacagacggtggaa
gctcggtcgtttcccagcctgtatgaccagctgaaggaggaacctgaggccctcaccctg
ctggctccagctgcaggggacacaattatctccctggatttcagctgcccagattcagag
atccagctgctgaaagacgtccctctctacaacgatgtcatgcttccatccaccagtgac
aagctggttctgtcccctctgcctaacagcgagcctctctgtgtcaacactgcctcaaag
gatgacaaacctgagagctacacagcctctccttctacagccaccagccacagctcttca
gagactgacagcacggtggacttctgcttccccatggactcagagatgagctctgatttc
aaactcgacttggtggagaagctgtttgccattgatccagagcccaagaccccctttgcc
acacaggcaatggaggaattagatctggagatgttggcgccctacatccccatggatgat
gacttccagctgcgcagtctgagtccagatgagcctctgtccagcgggccggttaaatcg
ctggagagctctccggtcagtgtcacacaagacatccacagctttcctagctccccgttc
agttcaccaagcagtcgcacggcttcaccagctcctcctgagccagtatcagtctctcat
cttgccaccatcttttccaagaggaccctgcaagtggacaaagaagttgcactaaggact
ctggcagctcagaacacacagcgtaaaagaaaactgggagacctaaagcagatcatcgga
cagggaactctgcctacagaacaagtagagcctggaaagaaactgagaacgtcggagtta
ggatcaaccacagccatacttctgctgccttcagacgtggccagtcgcctgctgggcagc
acgtcagagggcaccagttctctgttcaccctgccacagctcactcgctacgactgcgag
gtcaacgcccccctacagggccgtcagtacctgctgcagggagaggagctgctgcgcgct
ctggaccatgttaactga
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