Halichoeres trimaculatus (threespot wrasse): 141806914
Help
Entry
141806914 CDS
T11192
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141806914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
htc03021
]
141806914
03019 Messenger RNA biogenesis [BR:
htc03019
]
141806914
Transcription machinery [BR:
htc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141806914
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141806914
U7-dependent histone pre-mRNA processing factors
141806914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
141806914
NCBI-ProteinID:
XP_074548730
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MATKRKVEVIVPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRE
GRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDQVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KCAQGQRVSGILVKKNFNYHILNPSDLSTYTELAMSTVKQSQVIPFTGPYSLLVCHLRNL
TGDVEELDGTEKNTLKIFKNITLIHEVGMVMLEWIANPLNDMYADAVTTVVLEVQSNPKA
QKVMESQSTTMDMDVFQTRLGVMLQDMFGEECVDFSDGKNISLTVDGKTVNICLETRSVC
YEDESTEDDSLREMVELAVQRLYDALNPVV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaacgcaaagtggaggtgatagtccccgcggaggagagcgaccagcttctt
attcgtcctctaggtgctggacaggaagttgggcggtcatgcatcattctggagttcaaa
ggaagaaaaattatgctggactgtgggatccaccctggcttggaggggatggacgccctc
ccttacatagacttgatagacccagcagagatagacctactgctcatcagccactttcac
ttagatcactgtggagctctgccctggttcctccagaagaccagctttaaaggccgaacc
ttcatgacccatgctacaaaggccatctaccgctggttactgtcagactacgttaaagtc
agcaacatctctgcagatgacatgctgtacactgagactgacctggaagagagcatggac
aagattgagaccatcaatttccatgaggtcaaggaagtagctgggattaagttctggtgt
taccacgcaggccatgtgcttggagctgccatgttcatgatagagatagctggagtcaag
ctgctgtacactggcgacttctctcgtcaagaagacaggcatctgatggcagctgagatc
cccagtgtcaagcctgacatattaattatagagtcaacctacggcacacacatccatgaa
aagagggaggagcgagaggctcggttctgtaacactgtccatgatattgttaacagagaa
ggccgctgtttgatccctgtgtttgctttgggacgggctcaggagctgctgctcattctg
gatgagtactggcagaaccacccagagctccatgacatccccatctattatgcctcatcc
ctggccaagaaatgcatggccgtgtaccagacttatgtaaacgcaatgaacgacaagatc
cgcaaagccatcaacatcaacaacccttttgtctttaagcacatcagcaaccttaagagc
atggatcactttgatgacattggtcccagcgtggtgatggcgtctccaggtatgatgcag
agcggtctctccagagagctctttgagagctggtgcacggataagcgtaacggggtgatc
atcgctggatactgtgtggaggggacgctggccaagcacatcatgtcagagccagaggag
atcaccaccatgtctggacaaaagctgcagctgaagatgtctgtggactacatctccttc
tccgctcacacagactatcagcagaccagcgagttcatcagggctctgaaaccaccacac
gtgatcctggtccacggggagcagaatgagatggcccgtctgaaagcagcactgatcagg
gagtatgaggataatgaccaggttcacatcgaagtccacaatcctcggaacacagaagca
gtcacccttaacttcaggggagagaaactggccaaggtgatgggctctctggcagataag
aagtgtgctcaggggcagagggtgtcaggcatactggtgaagaagaacttcaactaccac
atcctcaatccctctgacctttcaacatacacagagctggccatgagcacggtgaaacag
tctcaggtcatccccttcactggaccttactcactgctcgtctgccacctcaggaacctc
acaggtgatgttgaagagttggatggaacggagaagaacactttgaagatctttaagaat
atcactctgatccacgaggttgggatggtgatgctggagtggatagcaaaccctctcaat
gacatgtatgcagatgctgtcaccaccgtcgtgctggaggtgcagtcaaacccaaaagct
cagaaagtcatggagagtcagagcactaccatggacatggacgttttccagactcgatta
ggagtcatgctgcaggacatgtttggggaggagtgtgtggacttcagcgatggtaaaaac
atctctctgactgttgatgggaagactgtgaatatttgcttggaaacaaggtcggtgtgt
tacgaagatgagagcacggaggacgactccctgagagagatggtggagctggcggtgcag
cggttgtatgatgcactaaacccagtcgtgtga
DBGET
integrated database retrieval system
