Halichoeres trimaculatus (threespot wrasse): 141809623
Help
Entry
141809623 CDS
T11192
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03013
Nucleocytoplasmic transport
htc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141809623 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
141809623 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htc03019
]
141809623 (thoc6)
03041 Spliceosome [BR:
htc03041
]
141809623 (thoc6)
Messenger RNA biogenesis [BR:
htc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
141809623 (thoc6)
Spliceosome [BR:
htc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
141809623 (thoc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_NOL10_N
Beta-prop_EML_2
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_SCAP
TRM82_WD
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_ACSF4
CFAP251_N
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IP5PC_F
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
DUF5654
Beta-prop_TEP1_C
FA_FANCE
Motif
Other DBs
NCBI-GeneID:
141809623
NCBI-ProteinID:
XP_074552826
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIALFSLSAALSPDATSLSQKPVLTFTAHE
GPVFSLLSNDCQLLSTGNGEISAWSWNELIKKNVKPVWTKRPNYKSSLEIPEINAMVINP
RDNSLVVGGGDNNIHILDLEHGVFKGVLQGHSDYVHCVTVRDREAEILSGGEDGAVRMWD
SRTGQCVHCIEVYKYESCARPQYGKWISCVTTDSDWMLCGGGPSLSLWHLRSLSPTSVFP
LKGCQRQAAFHQDMILSVGEGPFVSHCLLGGDVKAQIPCTPQSLNTLQHNTKSTEHRVLT
VGGSSDHIDVFTNLSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggccccgttgagctgctccacatgtccgtcttctcccagagtttctccccctgtggt
cgattcctggcagctggaaacaattatggagagattgccctctttagcctgtctgcagct
ctgagtccagatgctacctcgctgagtcagaaaccagtcctcactttcacagcccatgag
ggtcctgtgttttctctgctctccaacgactgtcagctcctcagcacaggaaacggagag
atcagcgcatggagctggaatgaactcatcaagaagaatgtcaaacctgtgtggacaaaa
cgaccaaactacaaatccagtctggagatccctgagatcaatgccatggtcatcaacccc
agagacaacagtctggtagtcggaggaggagataacaacatccacattctggacctggag
cacggtgtcttcaagggggtgctgcagggtcactcagactatgtgcactgcgtgactgtg
cgagatagggaggcagagatcctgtctgggggggaggacggtgccgtgaggatgtgggac
agccggacgggtcagtgtgttcactgcatcgaggtctacaagtacgagagctgtgctcgg
cctcagtacgggaaatggatcagctgtgtgaccacagactcagactggatgctgtgtggt
ggaggaccatctctgtccttgtggcatcttcgctctctgtctccaacctcggtcttcccc
ctgaagggctgccagagacaggctgccttccaccaggatatgatcttgtctgtcggtgaa
ggtcccttcgtgtctcactgtctgctgggtggagacgtcaaagctcagattccctgcaca
ccacagagcctgaacacactgcagcacaacaccaaaagcaccgagcatagggtcctgact
gtgggtggcagcagcgatcacatcgatgtgtttactaacttgtcgtaccgagcgttctca
ctcagcttctga
DBGET
integrated database retrieval system
