Halichoeres trimaculatus (threespot wrasse): 141809811
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Entry
141809811 CDS
T11192
Name
(RefSeq) putative ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141809811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
htc03041
]
141809811
03009 Ribosome biogenesis [BR:
htc03009
]
141809811
Enzymes [BR:
htc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141809811
Spliceosome [BR:
htc03041
]
Complex A
U1 snRNP components
U1 related factors
141809811
Complex B
141809811
Ribosome biogenesis [BR:
htc03009
]
Eukaryotic type
Pre-60S particles
Helicases
141809811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
141809811
NCBI-ProteinID:
XP_074553114
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKKHWNLDELPKFQK
NFYQEHPDTARRPLQEVEQYRRSKEVTVKGRDCPKPILKFHEAAFPSYVMDIISKQNWTE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVAAEYGRVSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAE
DRGGRGRGGRGGYKDDRRDRYSGGGRSNYGGGSYRDRDGDRGFGNGPKSAFGGNKAQNGG
NYGGNSGNSGSGYGNNSYNNSNGQGNFGAPTNQVGAFGNQSFQGPPQFGAMQRAAQNGMN
HPPFPFNSQPPLQAQQPPPPPPMVPYPMPPPFPQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggttttccgacagagatcgtggcagagatagagggtatggtggaggacctcct
cgctttggtggtggtggaggaggcaacaggggcggacctcctcccgggaagtttggcaac
cctggcgagaggctgcgtaaaaaacactggaacctcgatgagcttccaaagtttcagaag
aacttctaccaggaacacccagatactgctcggagaccacttcaagaggttgaacaatac
cgtcgaagcaaagaggtgactgtgaaaggcagagactgtccaaaacctattttaaaattc
cacgaggctgcttttccaagctacgtcatggacattattagtaaacaaaactggactgaa
ccaacacccatccaatcccaaggctggccggtcgctctgagtggcaaagacatggttggc
atcgctcaaactgggtctgggaaaaccctggcataccttttgcctgcaattgtgcacatc
caacatcagccattcttggagcatggagatggaccaatatgcttggtgctggcaccaacc
cgtgagctggctcagcaggtgcaacaagtggctgctgaatacggcagggtgtctcgtctc
aagagcacctgcatctatgggggagctcccaaaggacctcaaatcagggaccttgaaaga
ggtgttgagatttgcattgccaccccaggtcgcctcattgacttcctggagtgcggtaag
actaatttgcgccgttgcacttacctggtgctggatgaagccgaccgcatgctggacatg
ggatttgaacctcagatccgcaagatagtggaacaaattcggccagatcgtcagaccctg
atgtggagcgccacctggccaaaggaagtccgccagctggctgaagacttcctgaaggac
tacgtgcagatcaacatcggtgcactacagctcagtgccaaccacaacatcctgcagatt
gttgatgtatgcaatgacatggagaaggaggacaaactgatccgtttgcttgaggaaata
atgagcgaaaaggagaacaagaccatcatctttgtggaaaccaaaaggcgctgtgatgag
ctcaccagaaggatgagaagagatgggtggccagctatgggaattcatggagacaagagc
caacaggagagggattgggtccttaatgagttcaggtatggcaaggccccaatcctcatc
gccacagatgtggcctcccgcggcttagatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcctccgaggattatatccaccgcattggacgcacagcccgcagtcaa
aaaacaggcacagcttacaccttcttcacccccaacaacatgaaacaagccagtgacctt
atctctgtgctccgcgaggccaaccaggccataaaccccaagctgatccagatggcagag
gacagaggaggtcgtggaagggggggaagaggtggctacaaggacgaccgtcgggatagg
tattctgggggtgggagaagcaactatgggggcggtagctacagggacagagacggtgat
cgagggtttggcaatgggcccaagagtgcctttggtggcaataaggcccaaaatggtggc
aactatgggggtaacagcggtaactccggcagtggctacggtaacaacagttacaacaac
agcaatggacagggtaactttggtgctccaacaaatcaggtgggtgcctttggtaaccaa
agctttcagggtccccctcagttcggggccatgcagagggctgctcagaacggcatgaac
caccctccttttccatttaactcacagccaccactgcaggcccaacagccgcctcccccg
ccaccaatggtgccctaccccatgccgccacccttccctcagtag
DBGET
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