KEGG   Hydrogenobacter thermophilus: Hydth_0016
Entry
Hydth_0016        CDS       T02106                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hte  Hydrogenobacter thermophilus
Brite
KEGG Orthology (KO) [BR:hte00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hte02048]
    Hydth_0016
Enzymes [BR:hte01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Hydth_0016
Prokaryotic defense system [BR:hte02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Hydth_0016
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD bHLH_STRA8 DUF5100 CEP76_N
Other DBs
NCBI-ProteinID: ADO44426
UniProt: D3DF80
LinkDB
Position
complement(12980..16147)
AA seq 1055 aa
MYAKLDEEYYVENPFLAQLQKIGWKIYRQNKNNPEDVKEIISFDSNGEPIYGNSVKFRES
FREVILEDELKKSIKRINPWIEDDQINEVVRRITTPQANSLIEANREIHDLLIENTSVSE
NRKTGEKSPTVRYIDFKNPDNNSFIAISQFKVNIPGTGKHIIPDIVLFVNGLPLVVVECK
SPAITDPITEAITQLMRYSNRRGAKEGNEKLFWYNLFMIATSKQVAKLGTITSGYEHFNE
WKDPYPYTLLDINKNGTITSQDVLIQGTLTKNNLLDILRIFTLFVEDSKGPGVIKIVPRY
HQFRAVKKIVKRIKEGQTPEEKGGIVWHTQGSGKSLTMMLTVRAINKDPELSKFKIVFIT
DREQLEKQLRATSKSVGYTVNHADSIEKLKELLRTDTPDLVMAMIHKFQERDLSAKFPTL
NESPNILVLIDEAHRTQYNILGANLRKALPNSVKIAFTGTPIEKTEQTFGDYIDKYTIKQ
AVEDGVTVEIVYEGRAHLAEISDEEAANAKFESVFYAFDNEEKQLILGKYTWKSYLENEN
VIKEKAKDIIEHYITHIFPNGFKAQVIAVSRLAAVRYKEKLEEALKEKIAELEKNNPNNI
DIDTLKRLKVAVIISGTPNDDPQIYKKEYTDVNEHDKNIKSFKMPFNKSDEKIGINGDVG
IIVVNEMLVTGFDAPIEQALYLDNVLKGHRLLQAIARVNRVYKNKYCGYVVDYVGVFNHL
KEALAVYSDSDIEEISQTVVNKSKIKDELKYIHNQIEDFFKKFKISNWRENIDECIDLLE
DEEIREEFITLVRKFNSTLDKLLPDPEALKYTKDLKVINFIKEAARQRYRDDKLSIKDVS
NKIREIVEQYLVSKGIDPKIPPIPLLSDEFTIKLKQKPPKAKAVELEYAIKEHIEKHFEE
DPELYERFSDKLKKILEEYKENWDLLAEKLENLRIEIKKGREEENTYELDPKKEMPFLGL
LKDMILGKEPLEKYSPDQVEFLVKLTKDILKIIKGKIKIVDFWENYTKQKELIGEIISHL
LKQGRDNNIFNKRNEIAQRLLELAYHIYGGKTDGN
NT seq 3168 nt   +upstreamnt  +downstreamnt
atgtatgctaagcttgatgaagaatattatgtagaaaatccatttcttgctcagcttcaa
aagattggttggaagatttacagacaaaataaaaataatcctgaagatgtaaaagaaatt
atcagctttgatagtaatggcgaacctatctatggtaatagtgtaaagtttagagaaagt
tttagagaggttattcttgaagacgaacttaaaaaatccattaaaaggataaacccatgg
atagaagatgaccaaataaatgaagtagtaagaagaataacaacaccacaagcaaattct
ctaattgaagccaatagagagattcacgatttattaattgaaaatacatcagtctcagaa
aatagaaaaacaggagaaaaaagcccaacagttaggtatattgattttaaaaatccagac
aataactcttttattgccatatctcaatttaaagttaatatccctggaactggaaaacat
attattcccgatatagtcctttttgtcaatggcttgcctttggttgttgtagaatgcaaa
tctccagcaatcacagacccaataactgaagccattactcaacttatgagatattcaaac
agaagaggagcaaaagaaggaaatgaaaaacttttctggtataacctatttatgattgcc
acatcaaaacaagtggcaaaattgggaactatcacatcaggatatgaacattttaacgag
tggaaagacccgtacccttatacacttttggatataaacaaaaatggaacaataacaagc
caggatgttttaattcaagggactcttacaaaaaacaatttattagatatacttcgcatt
tttaccctttttgttgaagattccaaaggtccaggagtaataaaaatagtcccaagatat
caccaattcagagctgtaaaaaagatagtaaaaagaataaaagagggacaaacgccagaa
gaaaaaggtggcatagtttggcatacacaggggtcgggtaagtcattaaccatgatgcta
actgtcagagcaataaataaagatcccgagttaagtaaatttaagatagtgtttataacc
gatagagaacaacttgaaaaacagctaagagctacttcaaaaagtgttggttatacagtt
aatcatgctgatagtatagaaaaattaaaagaacttctacgaacagacacacctgattta
gttatggcaatgattcataaattccaagagagagatttatcagcaaaattcccaaccctt
aacgaatctccaaacattctggtattaattgatgaagctcacagaactcaatacaacatt
ttaggagctaatctaaggaaagcacttcctaactccgtaaagatcgccttcactggaaca
cctatagaaaagacagagcaaacatttggagattatatagataaatacaccataaaacag
gctgttgaggacggtgtaacagttgaaattgtatacgaaggaagggcacatttagcagag
atatctgatgaagaagcagctaacgcaaagtttgaatcagttttctatgcatttgataat
gaagaaaagcaacttatattagggaaatacacttggaagagctaccttgaaaatgaaaat
gtaataaaagaaaaagcaaaagatataatagagcattacataacccacatttttccaaat
ggttttaaagcacaggttatcgctgtatcaagactcgcagctgtaagatacaaagaaaag
cttgaggaagcacttaaagaaaaaatagcagaacttgaaaaaaataaccctaacaacatt
gatatagacaccttaaaaaggttaaaagtagccgttataatatctggcacacccaatgat
gacccacaaatttacaaaaaagagtatacagatgttaatgagcatgacaaaaatataaaa
agttttaagatgccatttaacaaaagtgatgaaaaaataggaataaacggggatgtgggt
ataatcgttgtaaacgagatgcttgttacaggttttgatgctccaatagagcaagcttta
tatcttgataatgtactaaaaggacatagattactgcaggcaatagcaagagttaacaga
gtttataaaaataaatattgtggctatgtagttgactatgttggtgtatttaatcatttg
aaagaagctcttgcagtttactctgatagtgatattgaagaaataagtcaaactgttgtc
aataaatcaaaaattaaagatgaacttaaatatatccacaatcaaatagaggattttttc
aaaaaatttaaaatctctaattggagagagaatattgatgaatgtatagacctgcttgaa
gatgaagagataagagaagagtttataactcttgttcgcaagtttaatagcacattagac
aagcttcttcctgatccagaagcattaaagtatacaaaagacttaaaggttattaacttt
ataaaagaagctgcaagacaaaggtacagagacgataaactaagcataaaagacgtaagc
aataagataagagaaattgtagagcaatacttggtatcaaaaggaatagacccaaaaatt
cctcctattcctttattgtctgatgagtttactattaaattaaaacaaaaaccaccaaaa
gccaaagcagtagaattggagtatgcaataaaagaacatattgaaaaacattttgaagaa
gaccctgaattgtatgaacgtttttcagacaaactaaaaaagattcttgaagaatataaa
gaaaattgggacttactggctgagaagttagaaaacttaagaattgagattaaaaaagga
agagaggaagaaaacacatacgaattagacccgaaaaaggaaatgccattcttaggatta
ctgaaagatatgatcttgggtaaggaacctttagaaaaatacagcccagatcaggttgaa
ttcttggttaaactaaccaaagatatattaaaaatcatcaaaggaaaaataaaaatagtc
gatttctgggaaaactacacaaaacaaaaagaactaataggtgagataatttcccattta
ttgaagcaaggacgagataataatatctttaacaaaagaaatgaaatagctcaaagacta
ttagagcttgcatatcacatttatggaggtaaaacagatggaaattga

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