Hydrogenobacter thermophilus: Hydth_0024
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Entry
Hydth_0024 CDS
T02106
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hte
Hydrogenobacter thermophilus
Brite
KEGG Orthology (KO) [BR:
hte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hte03009
]
Hydth_0024
Enzymes [BR:
hte01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Hydth_0024
Ribosome biogenesis [BR:
hte03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Hydth_0024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_31
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_25
PrmA
Mu-transpos_C
TehB
TRM
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ADO44434
UniProt:
D3DF88
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All DBs
Position
22652..23914
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AA seq
420 aa
AA seq
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MKVLPELSIKKIVYGGYGLAEYKGKKVFVRYAAPMELLSAQVIKEKGDHIEATAKEVIIS
SPSRKDPPCRYYYYCGGCQLQHIDTDQQVRIKEDILIESLRRIGNLEISALGESIRSKQD
FGYRTRVQFKVSNGSLGFFAWGTHELVKIDQCLLVHPAMNDLIPSLQELSKKIPHLQELH
VLYSPSEDEFLLKVITPTIYDAEKLRKLKENVLPKKVVGIGNYSKLGDHLLKRYHIGRSF
TFMQVKNYRYRVSNDSFFQINFTLWEDLLNSVVVRDKRRVIELHCGAGFFSIPLSEGNHF
VISSDTNATAIKDAQYNAKLNSRDNIVFFHESAHQTLKKHAGETIDLLFLDPPRGGLTTD
ELSLVLQNKPKEIVYVSCNPTTLARDLGKMVRGGYSLKSVRLIDNFPQTYHIESVAYLEL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttgccagaactttccataaaaaaaatagtctacggaggctacggtcttgcc
gagtacaaagggaagaaagtctttgtaagatacgcagcgccaatggaactcctttctgcg
caggtcataaaagaaaagggggaccatatagaagctaccgcaaaagaggtaatcattagc
tcaccctcacggaaagacccaccttgcaggtattactactactgtggaggttgtcaactt
cagcacatagatacagatcagcaggtgaggataaaggaagacatccttatagaaagcctc
aggcgtataggaaacctggagataagcgccttaggtgagagcataaggtcaaagcaagat
tttggatacagaacacgggtgcagtttaaggtcagcaatgggagtttaggcttctttgcg
tggggaactcacgagcttgtaaagatagaccagtgccttttggtgcatccggcaatgaat
gacctcataccatcccttcaggaacttagcaagaagattccgcaccttcaggaattgcat
gtgctttactcacccagcgaggacgagtttctcctcaaggtgataactcctaccatttac
gatgctgaaaaactcaggaagctaaaagaaaatgtcctacccaagaaagtggtgggtata
ggaaactactcaaaacttggggatcatcttttgaagaggtatcacataggaaggagtttc
actttcatgcaggtaaaaaattacagatacagagtaagcaacgactcgttttttcagata
aacttcaccctctgggaggaccttctaaacagcgtagtggtgagggataaaagaagagta
attgaacttcactgtggagcaggattttttagcatacctctttctgaaggcaaccacttt
gtcatctcctcagacaccaacgcaactgctataaaagacgctcagtataatgccaagctt
aattcaagagataacatagtctttttccacgaaagcgcacatcaaaccctcaaaaagcat
gcgggtgaaaccatagaccttctgtttcttgacccaccaagagggggactgaccaccgat
gagctcagcctcgttcttcagaacaaaccgaaggagatcgtctatgtttcttgcaatccc
acaacccttgccagagatcttggtaaaatggtacgtggaggctacagtttgaaaagtgtc
aggctcatagacaactttcctcagacctaccacatagaaagcgttgcatatcttgagcta
taa
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