Hydrogenobacter thermophilus: Hydth_0052
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Entry
Hydth_0052 CDS
T02106
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
hte
Hydrogenobacter thermophilus
Pathway
hte02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hte00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hydth_0052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hte03000
]
Hydth_0052
Transcription factors [BR:
hte03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hydth_0052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
GAF
AAA_5
AAA_16
AAA_2
MCM
AAA
GAF_3
Mg_chelatase
KAP_NTPase
AAA_22
AAA_7
TIP49
nSTAND3
AAA_29
DUF815
IIGP
ABC_tran
VapE-like_dom
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
ADO44462
LinkDB
All DBs
Position
57852..59369
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AA seq
505 aa
AA seq
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METKRQLSTREVTIINEVAKILSKGMNFLESAGEVLKILYSFWDVKYSYVALYRKDLKLL
KIVKAFGLKEEEVERGLFKRGEGIIGKVYKSGVPVVLSDLSTNSYLNRTGLKERLEGSES
FIAVPIRIGGEIIGVLALFKSFDKKESVEKAVELLIILGTMIGMLYKLEERINMERQEWE
EEKKALTQALGKKYSLEGIIGRSVAIKNLIDLVERVSQTDITLLLTGESGTGKSLIAKAI
HFLSHRKEKPFVTINCSAIPEALLEAELFGYEKGAFTGAYTSKKGKFEIANGGTVFLDEI
GDMPLSLQPKILRVLQEKEIEKLGSERSIKVDVRIISATNKDLRQLVQKGDFREDLYYRL
SVLPIHIPPLRERKEDIPLLVDHFLNTFNQKYSKNVKIDAKALELMMEYPWYGNVRELEN
TIERLVILKDGIVKESDLPSYFFVELSRDEPRNLPSVIELTEREEIIKALERTGYVKSRA
AKLLGYTLRQLDYRIRKYGISLKKF
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaaagacagcttagcacacgagaggtcaccatcataaacgaggttgcaaag
atactaagtaagggtatgaactttttggaaagtgcaggggaggtacttaaaatactttac
tccttttgggatgttaaatacagttatgtagccctttacagaaaggatcttaagcttctc
aaaatagtgaaagcttttggcttgaaagaggaggaagtggagagaggtcttttcaagaga
ggagagggtattataggcaaggtttataaaagcggtgtacctgtggtactttcagacctc
agcactaactcctacctgaataggacaggtttaaaagagagattggaaggaagtgagtcc
tttatagcggtacctataagaataggtggcgagatcataggtgtgcttgctctttttaag
agctttgataaaaaggaaagcgtggagaaagctgttgagcttctgataatacttgggact
atgattggcatgctttacaagttggaagaaagaataaacatggaaaggcaggagtgggaa
gaggagaaaaaggctctgacgcaggcgcttggtaaaaagtatagtcttgagggcataata
ggcagaagtgttgctataaagaatctcatagacttagtagaaagggtatctcagacggat
ataacgcttcttttaactggtgaaagtggaactggtaagagccttatagccaaggctata
cactttttgagccataggaaggaaaagcctttcgttaccataaactgctctgctatacct
gaggcactccttgaagctgagctttttggctatgaaaagggtgcctttacgggtgcttac
acttctaaaaaaggaaagtttgagatagctaatggtggtacggtattccttgatgagata
ggtgatatgcccctctcattacaaccaaagatactgagagttcttcaggaaaaggagata
gaaaagcttggtagtgagagaagcatcaaagtggatgttaggataatatcagcaaccaat
aaggacttacggcagttggtccaaaagggggacttcagagaggacctgtactatcgcctc
agtgtgcttcctatacatataccaccactgcgggagaggaaggaggatatacctcttttg
gtggaccactttttaaacaccttcaatcaaaagtacagtaagaatgtaaagatagatgcc
aaagccttggagcttatgatggagtatccttggtatggtaatgtgagagagcttgaaaat
actatagagaggttggtaatactaaaggacggcattgtaaaggagagtgacttaccgtct
tacttttttgttgaacttagcagagatgagcccagaaacctcccatccgttatagagctt
acagaaagggaagagataataaaagctcttgaaagaactggctatgttaagtcaagggct
gccaagcttctcggttatactctcaggcagcttgattacagaatacgcaagtatgggata
agcttgaaaaaattctga
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