KEGG   Hydrogenobacter thermophilus: Hydth_0220
Entry
Hydth_0220        CDS       T02106                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hte  Hydrogenobacter thermophilus
Pathway
hte02024  Quorum sensing
hte03060  Protein export
hte03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hte00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Hydth_0220
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Hydth_0220
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hydth_0220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hte02044]
    Hydth_0220
Enzymes [BR:hte01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Hydth_0220
Secretion system [BR:hte02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Hydth_0220
  Eukaryotic Sec-SRP protein
   Hydth_0220
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 AAA_30 CbiA AAA_17 AAA_14 cobW MMR_HSR1 AAA_19 CLP1_P MobB nSTAND3 AAA AAA_7 AAA_24 AAA_16 VirC1 YqeC SRPRB 6PF2K AAA_31 AAA_5 AAA_33 ABC_tran PIF1 ATP_bind_1 RsgA_GTPase Helicase_RecD AAA_28 Thymidylate_kin
Other DBs
NCBI-ProteinID: ADO44628
UniProt: D3DFT6
LinkDB
Position
complement(221850..223160)
AA seq 436 aa
MLDLLTERFSKSLSKLRGVRKLTEKQVNDILRDIRMALLEADVDYDVVKSFLKKVRDRAI
NEDIKNKLSPADSVVLTVYEELTSILGGEKADLKRGVVIFVGLQGTGKTTTIGKLANFLK
NQSFKVAVSSTDVRRPAAMLQLQRLAEKVGVPYYSFDEASPVEIATKALERAKKEGVDYL
LIDTAGRLHIDEELMEELKRIKEAVKPSEVIYVADAMQGQEALRALKAFHESITLTGVIL
TKMDGDARGGVALSVKEAIGVPIKFVGVGEKLEDIEIFYPDRIAQRILGLGDLQSLIEKA
QQIIPEDEAQVLATRIMMGEFDLEDMLKQIRFIKSMGPLEKILGMIPGVSAELKNLKIDE
KKFKKTEAIILSMTKEERRNPKIINMSRKVRIAKGSGTSVGDVNKVLKEYEEMKKMIKRL
KGMQGIPKLPRFPFKF
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgcttgacctgcttacagagagattcagcaagagtctatccaaattaaggggtgttaga
aagctaacggagaagcaagtcaacgacattttaagagatataaggatggcactcttggaa
gctgatgtagattacgatgttgtaaagtcctttctcaagaaggtcagagacagagctata
aacgaggatataaagaataagctttcccctgctgacagcgtagtgctgacagtttacgaa
gagcttaccagcatacttggtggtgaaaaagctgacctcaaaaggggagtggtaatcttt
gtgggactgcagggaactggaaagactaccaccataggcaaacttgccaactttttaaag
aaccagagctttaaagtggctgtctcttcaacggatgtaagaagacctgcagccatgctc
cagctccagaggcttgctgagaaagtgggagtaccatattacagttttgatgaagcttca
cctgtagaaatagccacaaaagctctggaaagagctaaaaaggaaggtgtggattacctg
ctcattgataccgctggaaggcttcacatagatgaggagctgatggaggagctaaagcga
ataaaggaagctgtcaagccttctgaagttatttatgttgcggatgctatgcagggacaa
gaagctctgcgagctttaaaggcttttcacgaaagcattaccttaacgggagtgatcctt
accaagatggatggtgatgcgaggggtggggtggcgctttctgtcaaggaggcaataggt
gtacctataaagtttgtgggtgtaggcgaaaaactggaagatatagagattttttatcct
gacaggatagctcagagaatactgggacttggtgatcttcaaagccttatagagaaagct
cagcagattatacccgaagatgaagcgcaggtgcttgccaccaggatcatgatgggagag
tttgaccttgaagacatgttaaagcagataaggtttataaagagcatgggaccacttgag
aagatcctcggcatgataccaggcgtgagtgcagaactaaaaaatttaaaaatagacgag
aagaaattcaaaaaaactgaagccataatactttccatgaccaaggaagaaagaagaaat
ccaaaaatcataaatatgagcaggaaggtaaggatagcaaaaggcagtgggacgagcgta
ggggatgtaaacaaggttttaaaagagtacgaagagatgaaaaagatgataaagagactc
aagggcatgcaagggatacctaaactgcccaggtttcccttcaagttttag

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