Hydrogenobacter thermophilus: Hydth_0839
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Entry
Hydth_0839 CDS
T02106
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hte
Hydrogenobacter thermophilus
Pathway
hte03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hydth_0839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hte03400
]
Hydth_0839
Enzymes [BR:
hte01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Hydth_0839
DNA repair and recombination proteins [BR:
hte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Hydth_0839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF6037
Motif
Other DBs
NCBI-ProteinID:
ADO45236
UniProt:
D3DHJ7
LinkDB
All DBs
Position
complement(780246..781088)
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AA seq
280 aa
AA seq
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MPSLGIHVSSAGPILKIFERAREVGAEAFQFFLRSPRAWKAKSISQWEIEEFIKLKGSWG
PLMVHAPYLINLASSHPELRSKSIEVFLEELKICELLKIEYYNFHPGTAKDVSQEEGLRN
IIKGLEEIFSSFIPSYTCVLFENTAGERGDLGKNTQELKRLIEPFKGLKVGVCIDTCHAF
AYGYAINTKEGFEAFKGEIDRSIGLDKVKAIHCNDSKVPLGAKKDRHEHIGHGYIGLEGF
RLFLKDPYFSQLPYYLETPKVDDWDRKNLQTLRKLLSESH
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcttaggcattcatgtatcgtccgcaggacctattttaaaaatctttgagaga
gccagagaagtaggagcggaagcttttcagttctttttgagaagcccaagagcctggaag
gcaaagagtataagtcagtgggaaatagaggagtttataaaactcaaaggaagctgggga
cctctaatggttcacgctccttaccttattaacttggcaagttcccatccggagctgagg
agcaaatccattgaggtttttcttgaagagctaaaaatatgtgagcttttaaaaatagag
tattacaacttccatcccggcacagccaaagatgtgagccaagaagagggattgagaaac
ataataaagggccttgaggagatcttttccagctttataccttcttacacatgcgtgctt
tttgaaaacaccgcaggtgagcggggagaccttggtaaaaacacccaggagctaaagaga
ctgatagagccctttaaggggctaaaagtgggagtgtgtatagatacatgccacgctttt
gcatatggctatgccataaatacgaaggagggttttgaagcttttaagggtgagatagac
agaagcataggtttagataaagtgaaagctattcactgcaacgattcaaaagtaccgctt
ggtgcaaagaaagacaggcatgagcatataggtcatggctacataggtcttgaaggcttt
aggctttttttgaaagatccctacttttcacagctcccttactatctggaaaccccaaag
gtagatgactgggacagaaaaaatcttcaaactctgagaaaactgctctcagaaagtcat
taa
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