Hydrogenobacter thermophilus: Hydth_1168
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Entry
Hydth_1168 CDS
T02106
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hte
Hydrogenobacter thermophilus
Pathway
hte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hydth_1168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hte03019
]
Hydth_1168
03016 Transfer RNA biogenesis [BR:
hte03016
]
Hydth_1168
Enzymes [BR:
hte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Hydth_1168
Messenger RNA biogenesis [BR:
hte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Hydth_1168
Transfer RNA biogenesis [BR:
hte03016
]
Prokaryotic type
tRNA degradation factors
Hydth_1168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ADO45556
UniProt:
D3DIH8
LinkDB
All DBs
Position
complement(1071597..1073714)
Genome browser
AA seq
705 aa
AA seq
DB search
MMHKVIANLGDKDPIIIETGHYAKLSDGAVVVRQGDTAVLVTAVVSEEPLQDIDFMPLSV
DYREQSSAWGKIPGGFVKREGKPTDREVLVSRVIDRPIRPLFPEGFFHDVVITALTLSAD
DKYDPDVLAITGASAALHISRIPFEGPIAGLRVCRIEGKFVANPTYEERQKADLEIILAV
SKDSIIMVEGGAKEVDEEVFANALYFGLEAGKELISAQEELREKVGVPKMSFEGIHLPQE
IKDLMEEFCTERILKTFEIQDKRERKENTSAILREFIERHQIPEELHFKVGYHYKKLISK
LMRQKVLNEGVRIDGRKPEEIRPISIEIKPFERPHGSAIFTRGQTQAFATVTLGSPHEAQ
LVESIYEGEVFKRFMLHYNFPPFSTGEAKPWGPPRRREIGHGALAERAIEPLIPPEEEFP
YIIRIVSNILESNGSTSMATVCAGSLALFDAGVPIKKHVAGIAMGLIMEGERYVILSDIL
GDEDQLGDMDFKVAGTKDGITSVQMDIKIKGLKKEIMIESLMQAKRGRLYILEKMYEAIP
EPRKELSPYAPRIEIITVPEEKAMLIIGPGGKTVKDIKEKTGTTVWVLEGGKVSLTAPSK
SAIDAAKEIIENLIRDVEVGKVYEGKVTRVEPYGVFVEILPGKVGLLHVSKMEGYVKDVR
AVFSVGDTLKVKVLEVDEQGRAKLTNMGLDDSRRSSAAERGTRNA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgatgcataaggtgatagccaatttgggggataaagaccctataattatagaaacgggg
cactatgccaaactttctgacggtgcggtagttgtaagacagggtgatactgccgtcttg
gttactgcggtagtctcagaggagcctttgcaggacatagactttatgcctctgtctgtt
gattatagagagcaatcgtcagcctgggggaagataccagggggttttgtaaagcgggag
ggcaaacctacagacagggaagtgcttgtgtcaagagttatagacagacctataagacct
ctctttcctgaaggcttttttcatgatgtggttataacggcacttactctctccgcagat
gacaagtatgatcctgatgtgcttgccataactggtgcatctgcggctctccacatttcc
aggataccctttgaaggtcccatagcggggctcagggtatgcaggattgaggggaagttt
gtggcaaaccccacatacgaagagagacagaaggctgaccttgaaatcatcttagctgta
agtaaagacagcataattatggtagagggtggtgcaaaggaggtggatgaggaggtcttt
gccaacgctctatactttggcttagaggctggaaaagagctcatatccgctcaggaagag
ttgagggaaaaagtaggcgttccaaagatgagctttgaaggcatccatcttcctcaagag
ataaaggatcttatggaagagttctgcacagaaagaattcttaaaacctttgagatacag
gacaagcgggaaaggaaggaaaacacatccgctattttgagggagtttatagaaaggcat
cagataccagaggagcttcactttaaggtgggttatcactacaaaaagctcataagtaag
ctgatgagacaaaaggtgctaaacgaaggtgtaagaatagacggcaggaaacccgaagag
ataaggcctataagcatagagataaagccttttgaaagacctcacggtagcgccatattc
accagaggacagacgcaagcttttgcaaccgttaccctcggctctcctcacgaagcgcag
ctggtagagagcatatacgagggggaggttttcaaaagattcatgctccactacaacttc
cctcccttttctacaggtgaggcaaaaccatggggaccacccagaaggagagaaataggt
catggagcgctggcagaaagagccatagaaccactgattcctccagaggaagagtttcct
tacatcataaggatcgtatccaacatactggagtctaacggctctacatctatggctacc
gtgtgcgcaggttctttagctctgtttgatgcaggagttcccataaagaagcatgtggct
ggcatagccatgggtctcataatggaaggagaaagatatgtgatactttctgacatatta
ggtgacgaggatcagctgggagatatggactttaaagttgcaggcacaaaggacggaata
accagcgtgcagatggacataaagataaagggactaaagaaagagattatgatagaatcc
cttatgcaggcaaaaaggggaaggctctatatactggagaagatgtacgaggcaatacca
gagccgaggaaggagctttcaccttatgcaccaaggatagaaatcataacagtaccagag
gagaaagctatgctgataataggtccgggtggtaaaacggttaaggacataaaggagaag
acaggcaccactgtttgggtgctggagggtggaaaagtttctctgaccgcaccctccaaa
tcagccatagatgccgctaaagagattatagagaatctcataagggatgtggaggtgggt
aaggtatacgaagggaaggtgacaagagtggagccttacggtgtctttgtggagatcctc
cccggcaaggtaggtcttttgcatgttagtaagatggagggctatgtgaaggatgtgagg
gctgtctttagtgtaggggatactctaaaggtcaaggtgctggaggtggacgagcaaggg
agagcaaaactcaccaatatgggcttggatgatagccggcgtagctcagcggcagagcga
ggcactcgtaatgcctag
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