Hydrogenobacter thermophilus: Hydth_1838
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Entry
Hydth_1838 CDS
T02106
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hte
Hydrogenobacter thermophilus
Brite
KEGG Orthology (KO) [BR:
hte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hte03016
]
Hydth_1838
Enzymes [BR:
hte01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Hydth_1838
Transfer RNA biogenesis [BR:
hte03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hydth_1838
Prokaryotic type
Hydth_1838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADO46219
UniProt:
D3DKE7
LinkDB
All DBs
Position
complement(1687187..1688053)
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AA seq
288 aa
AA seq
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MVPSVILVDKPKGLTSFSVVEGIKKKFKVKVGHTGTLDPLATGLLILLINEATRYAEFFL
KLPKEYITTVKFGEITDTYDAEGKVVEKREIKVSCQDVKKVLQSFLGRILQLPPPHSAKR
IEGKRAYKLARKGLHVSLKPVEVSVYKAELVDCEMPYAKFVFCVSAGTYIRSLVHDIGLA
LGCGAYVEELRRTKIGQFDVQRAITYERLMCLDDLYGVSVPVWEALDFIPAIDLDAKSAK
TIKNGLFLYLPSCLEEETFVRLYEGKEFIGIGVIKGNRLKAYRLLPQT
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggtaccatccgtaattcttgtggataaacccaaaggcttgacttccttcagtgtggtg
gaaggtataaagaagaagtttaaagtgaaggtaggacacactggcactttagaccccttg
gctacggggcttttgatacttctgataaacgaagctacgagatacgcagagtttttcctc
aagcttcccaaagagtacataaccacagtgaagtttggtgagataacagatacttacgat
gcggagggtaaagttgttgaaaagagagagataaaagtctcttgccaagatgtaaaaaag
gttctgcaaagctttttgggaaggattcttcagctacctcctcctcactccgccaagagg
atagaaggtaaaagggcttataaacttgcaaggaagggcttgcatgtgtctctgaagcca
gtggaggtgtcagtttacaaagcagagcttgtagattgtgaaatgccatacgccaagttt
gtattctgcgtgtccgcaggcacatacataaggagcttagttcatgatattggattggcg
cttgggtgtggagcttatgtggaggagctgaggagaacaaagatagggcagtttgatgtg
caaagggcaataacctacgagagactgatgtgtctggatgacctttacggtgtgtccgtg
cctgtgtgggaagctcttgactttataccggctattgatcttgatgccaaaagtgccaaa
actataaaaaacggtctgtttttatacttgccttcttgccttgaagaagagaccttcgtg
agattatacgagggtaaagaatttataggtattggcgtgataaaaggcaatagattgaag
gcttacaggctacttcctcaaacttga
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